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Commit e9a9b808 authored by Kai Schleicher's avatar Kai Schleicher
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Update function for newest version of TrackMate

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2d_spots_in_fibers.py
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......@@ -198,8 +198,8 @@ def run_trackmate_dog_spot_detector(imp, spot_diameter, quality_threshold):
exportSpotsAsDots = True
exportTracksOnly = False
# labelIdPainting = LabelImgExporter.LabelIdPainting.LABEL_IS_INDEX_MOVIE_UNIQUE
label_imp = LabelImgExporter.createLabelImagePlus(trackmate, exportSpotsAsDots, exportTracksOnly, False) # labelIdPainting (needed in a future verion of TM)
labelIdPainting = LabelImgExporter.LabelIdPainting.LABEL_IS_INDEX_MOVIE_UNIQUE
label_imp = LabelImgExporter.createLabelImagePlus(trackmate, exportSpotsAsDots, exportTracksOnly, labelIdPainting)
label_imp.setCalibration(cal)
imp.close()
......
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