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  • cellpose_rewrite
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  • myosoft-imcf-2.2.0
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Created with Raphaël 2.2.029Apr25232216151413Feb1214Jan811Dec3Feb19Apr7Mar10Nov19Nov1865313Oct1298Formatting and correctionmastermasterSwitch to python module approachAdd method for measuring mean intensity in all fibersRefactor script 2c to use `imcflibs`Make the output dir input not mandatoryRefactor script 1 to use `imcflibs`Remove precision option, return all decimal places insteadRemove whitespaceReorganize measurement optionsCorrect parameter mix-up and return floats instead of intUpdate function for newest version of TrackMateAdd optional calibration parameterCalculate instead of measure the number of DAPI negative spotsCorrect typoUpdate user on progressClear ROI manager before adding and converting ROIsremove obsolete TODOAdd and use function to measure shape featuresChange to work with older versions of TrackMateUpdate default values for current userRemove GUI message about ROI expansionAdd spots_in_fibers description to READMERemove unnecessary function, its use, import and printsMerge branch 'spots-in-fibers' into 'master'Pass RoiManager to functionsRemove unused lineRemove RoiManager import, get from script parameter instead.Remove unused function, its execution and associated importMerge branch 'spots-in-fibers' of https://git.scicore.unibas.ch/imcf/myosoft-imcf into spots-in-fibersAdapt to new functionAdapt to new functionRemove unused function and importsRemove unused function and importsAdd TODORemove unnecessary semicolonRun Garbage Collector at the end of the scriptAdd missing spot diameter parameter to functionset default spot diameter to 0.3Change spot label ID painting methodFix syntax error