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imcf
noisee
Commits
dc34aafc
Commit
dc34aafc
authored
7 years ago
by
Niko Ehrenfeuchter
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src/main/resources/scripts/Plugins/NoiSee/NoiSee_Bead_Analysis.ijm
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2 additions, 2 deletions
...resources/scripts/Plugins/NoiSee/NoiSee_Bead_Analysis.ijm
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src/main/resources/scripts/Plugins/NoiSee/NoiSee_Bead_Analysis.ijm
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dc34aafc
...
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@@ -763,7 +763,7 @@ function process_beads() {
////////// create plots from bleaching measurements ////////// ////////// ////////// //////////
// linear decay = z-drift, exponential decay = bleaching
col_mean = "Mean(bead_intensity_vs_time)";
plot_mean = plotResult("
Z-drift or bleaching?
", "Frame", "bead intensity mean", col_mean);
plot_mean = plotResult("
Mean bead intensity over time
", "Frame", "bead intensity mean", col_mean);
addTextToImage(plot_mean, false, "Center", 22,
"A linear decay would be an indicator for a z-drift, an exponential decay for bleaching.");
addTextToImage(plot_mean, false, "Center", 96, "");
...
...
@@ -772,7 +772,7 @@ function process_beads() {
// this reveals only drift that is relvant for the regions that measure bleaching or z-drift.
// could in general be used to reveal xy-drift as it also interferes with SNR
col_std = "StdDev(bead_intensity_vs_time)";
plot_std = plotResult("Sta
ble Z-drift /
b
l
ea
ching measurement?
", "Frame",
plot_std = plotResult("Sta
ndard deviation of
bea
d intensity over time
", "Frame",
"bead intensity StdDev", col_std);
addTextToImage(plot_std, false, "Center", 22,
"Increase in the StdDev indicates a drift in X/Y.");
...
...
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