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{
"title": "drugsens: Automated Analysis of QuPath Output Data and Metadata Extraction",
"description": "A comprehensive R package for analyzing microscopy data output from QuPath software, specifically designed for drug sensitivity analysis in patient-derived cancer models. The package implements the methodology described in Labrosse et al. (2024) for quantifying drug sensitivity in 3D patient-derived ovarian cancer models.",
"upload_type": "software",
"publication_date": "2024-01-27",
"version": "0.1.0",
"language": "eng",
"keywords": [
"R",
"image-analysis",
"microscopy",
"QuPath",
"drug-sensitivity",
"cancer-research",
"ovarian-cancer",
"patient-derived-models",
"bioinformatics",
"data-analysis"
],
"license": "MIT",
"access_right": "open",
"creators": [
{
"name": "Lombardo, Flavio",
"affiliation": "University of Basel & University Hospital Basel",
"orcid": "0000-0002-4853-6838"
}
],
"contributors": [
{
"name": "Coelho, Ricardo",
"type": "Researcher",
"affiliation": "University of Basel & University Hospital Basel"
}
],
"references": [
"Labrosse et al. (2024). Protocol for quantifying drug sensitivity in 3D patient-derived ovarian cancer models. STAR Protocols. doi:10.1016/j.xpro.2024.103274"
],
"related_identifiers": [
{
"identifier": "10.1016/j.xpro.2024.103274",
"relation": "isImplementedBy",
"resource_type": "publication-article"
},
{
"identifier": "https://CRAN.R-project.org/package=drugsens",
"relation": "isSupplementTo",
"resource_type": "software"
}
],
"communities": [
{
"identifier": "ovarian-cancer-research"
}
]
}
![](https://img.shields.io/badge/R-%3E%3D%204.0.0-blue)
![](https://www.r-pkg.org/badges/version/drugsens)
[![DOI](https://zenodo.org/badge/751272301.svg)](https://doi.org/10.5281/zenodo.14747762)
# Overview
......