Merge branch 'master' into develop

doc/html/_sources/core/index.rst.txt

doc/html/_sources/core/pm3argparse.rst.txt

doc/html/_sources/core/runtime_profiling.rst.txt

doc/html/_sources/core/setcompoundschemlib.rst.txt

doc/html/_sources/dev_setup.rst.txt

doc/html/_sources/developers.rst.txt

doc/html/_sources/gettingstarted.rst.txt

doc/html/_sources/index.rst.txt

doc/html/_sources/license.rst.txt

doc/html/_sources/loop/all_atom.rst.txt

doc/html/_sources/loop/backbone.rst.txt

doc/html/_sources/loop/index.rst.txt

doc/html/_sources/loop/load_loop_objects.rst.txt

doc/html/_sources/loop/mm_system_creation.rst.txt

doc/html/_sources/loop/structure_db.rst.txt

doc/html/_sources/loop/torsion_sampler.rst.txt

doc/html/_sources/modelling/algorithms.rst.txt

doc/html/_sources/modelling/gap_handling.rst.txt

doc/html/_sources/modelling/index.rst.txt

doc/html/_sources/modelling/loop_candidates.rst.txt