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Commit d6f1f9b3 authored by Studer Gabriel's avatar Studer Gabriel
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bugfix

parent fc1dd148
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modelling/pymod/_afdb_modelling.py
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...@@ -548,7 +548,7 @@ def AFDBTPLSearch(fs_server, pentamatch, trg_seq, pentamatch_n = 100, ...@@ -548,7 +548,7 @@ def AFDBTPLSearch(fs_server, pentamatch, trg_seq, pentamatch_n = 100,
aln = seq.alg.LocalAlign(trg_seq, seq.CreateSequence("A", omf_s), aln = seq.alg.LocalAlign(trg_seq, seq.CreateSequence("A", omf_s),
seq.alg.BLOSUM62)[0] seq.alg.BLOSUM62)[0]
if seq.alg.SequenceIdentity(aln) >= seqid_thresh: if seq.alg.SequenceIdentity(aln) >= seqid_thresh:
bfactors = omf.GetBFactors("A") bfactors = omf.GetAvgBFactors("A")
summed_bfac = 0.0 summed_bfac = 0.0
current_pos = aln.GetSequence(1).offset current_pos = aln.GetSequence(1).offset
for col in aln: for col in aln:
......
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