@@ -67,7 +67,7 @@ $ validate-mmcif-file -a extra model.cif
$
```
If the URL points to a subdirectory, that must be reflected by the associates directory declared to the validation tool. The following example illustrates that the `extra` directory needs a `pae` directory storing the associated file as expected by `_ma_entry_associated_files.file_url`:
If the URL points to a subdirectory, this must be reflected by the associates directory tree declared to the validation tool. The following example illustrates that the `extra` directory needs a `pae` directory storing the associated file as expected by `_ma_entry_associated_files.file_url`:
@@ -81,10 +81,13 @@ $ validate-mmcif-file -a extra model.cif
$
```
### Misc. arguments
|**`--help`** (**`-h`**)|Print a help/ usage page for the validation tool.|
|**`--dict-sdb <SDB FILE>`** (**`-d`**)|Format dictionary in (binary) SDB format used for validating a ModelCIF file. The container comes with a SDB for ModelCIF and one for the original PDBx/mmCIF format.|
|**`--out-file <JSON FILE>`** (**`-o`**)|Instead of printing the output to `stdout`, store it in a JSON file.|
|**`--verbose`** (**`-v`**)|Write information from intermediate steps to `stdout`. This includes the raw output of `CifCheck`.|