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Commit 2b419445 authored by Bienchen's avatar Bienchen
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Testing

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modules/bindings/tests/test_hhblits.py
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...@@ -113,7 +113,8 @@ class TestHHblitsBindings(unittest.TestCase): ...@@ -113,7 +113,8 @@ class TestHHblitsBindings(unittest.TestCase):
'ALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKL'+ 'ALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKL'+
'LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVL'+ 'LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVL'+
'TSKYR') 'TSKYR')
self.hh = hhblits.HHblits(query_seq, self.hhroot) self.hh = hhblits.HHblits(query_seq, self.hhroot,
working_dir='testfiles')
a3m = self.hh.BuildQueryMSA('testfiles/hhblitsdb/hhblitsdb') a3m = self.hh.BuildQueryMSA('testfiles/hhblitsdb/hhblitsdb')
print "BIENCHEN A3M", a3m print "BIENCHEN A3M", a3m
self.assertTrue(filecmp.cmp(a3m, "testfiles/testali.a3m")) self.assertTrue(filecmp.cmp(a3m, "testfiles/testali.a3m"))
......
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