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Commit 2b419445 authored by Bienchen's avatar Bienchen
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Testing

parent 97c1367d
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......@@ -113,7 +113,8 @@ class TestHHblitsBindings(unittest.TestCase):
'ALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKL'+
'LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVL'+
'TSKYR')
self.hh = hhblits.HHblits(query_seq, self.hhroot)
self.hh = hhblits.HHblits(query_seq, self.hhroot,
working_dir='testfiles')
a3m = self.hh.BuildQueryMSA('testfiles/hhblitsdb/hhblitsdb')
print "BIENCHEN A3M", a3m
self.assertTrue(filecmp.cmp(a3m, "testfiles/testali.a3m"))
......
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