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schwede
openstructure
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3e24b967
Commit
3e24b967
authored
6 years ago
by
Studer Gabriel
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don't perform testing on centos6 anymore
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af6b27d2
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.gitlab-ci.yml
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3e24b967
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@@ -6,74 +6,6 @@
stages
:
-
test
# CentOS6 STAGE
test:centos6.6
:
stage
:
test
image
:
centos:6.6
before_script
:
-
echo "Running centos6.6 'before_script'..."
-
yum -y -q -e 0 install tcl
-
yum -y -q -e 0 install glibc-common
-
yum -y -q -e 0 install glibc-devel
-
yum -y -q -e 0 install libjpeg-turbo
-
yum -y -q -e 0 install freetype
-
yum -y -q -e 0 install libpng
-
yum -y -q -e 0 install mesa-libGL-devel
-
yum -y -q -e 0 install mesa-libGLU-devel
-
mkdir -p /scicore/soft/modules
-
ln -s /export/soft/apps/centos6/generic /scicore/soft/apps
-
ln -s /export/soft/modules/centos6/generic/all /scicore/soft/modules
-
source /export/soft/lua_lmod/centos6/lmod/lmod/init/bash
-
module use /scicore/soft/modules/all
-
module load CMake/2.8.12-goolf-1.4.10
-
module load Python/2.7.5-goolf-1.4.10
-
module load OpenBLAS/0.2.6-gompi-1.4.10-LAPACK-3.4.2
-
module load Eigen/3.2.1-goolf-1.4.10
-
module load numpy/1.9.1-goolf-1.4.10-Python-2.7.5
-
module load Boost/1.53.0-goolf-1.4.10-Python-2.7.5
-
module load OpenMM/6.1-Linux64
-
module load Qt5/5.9.3-goolf-1.7.20
-
module load LibTIFF/4.0.3-goolf-1.4.10
-
module load libpng/1.6.17-goolf-1.4.10
-
module load zlib/1.2.8-goolf-1.4.10
-
module load Perl/5.16.3-goolf-1.4.10
-
module load HH-suite/2.0.16-goolf-1.4.10-Boost-1.53.0
-
echo "... done running centos6.6 'before_script'."
script
:
-
echo "Testing on CentOS 6..."
-
echo " Building OST..."
-
mkdir build-ci
-
cd build-ci
-
cmake .. -DENABLE_MM=1
-DOPEN_MM_LIBRARY=$EBROOTOPENMM/lib/libOpenMM.so
-DOPEN_MM_PLUGIN_DIR=$EBROOTOPENMM/lib/plugins
-DOPEN_MM_INCLUDE_DIR=$EBROOTOPENMM/include
-DCOMPILE_TMTOOLS=1
-DENABLE_GFX=ON
-DENABLE_GUI=OFF
-DUSE_NUMPY=1
-DUSE_RPATH=1
-DPYTHON_ROOT=$EBROOTPYTHON
-DEIGEN3_INCLUDE_DIR=$EBROOTEIGEN/include
-DFFTW_LIBRARY=$EBROOTFFTW/lib/libfftw3f.a
-DFFTW_INCLUDE_DIR=$EBROOTFFTW/include
-DBOOST_ROOT=$EBROOTBOOST
-DQT_QMAKE_EXECUTABLE=$EBROOTQT5/bin/qmake
-DPNG_LIBRARY=$EBROOTLIBPNG/lib/libpng.so
-DPNG_INCLUDE_DIR=$EBROOTLIBPNG/include
-DPNG_PNG_INCLUDE_DIR=$EBROOTLIBPNG/include
-DZLIB_LIBRARY=$EBROOTZLIB/lib/libz.so
-DZLIB_INCLUDE_DIR=$EBROOTZLIB/include
-DTIFF_INCLUDE_DIR=$EBROOTLIBTIFF/include
-DTIFF_LIBRARY=$EBROOTLIBTIFF/lib/libtiff.so
-DOPTIMIZE=1
-
make -j
2
-
echo " ... done building OST."
-
echo " Running unit tests for OST..."
-
make check
-
echo " ... done running unit tests for OST..."
-
echo "... done testing on CentOS 6."
# CentOS7 STAGE
test:centos7.3
:
stage
:
test
...
...
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