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Commit 7d7258c9 authored by Studer Gabriel's avatar Studer Gabriel
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bugfix

parent 5395c0eb
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......@@ -1136,14 +1136,15 @@ class Scorer:
full_trg_coverage = True
trg_patch_one = self.target.CreateEmptyView()
for r in mdl_patch_one.residues:
mdl_cname = r.GetChain().GetName()
aln = self.mapping.alns[(flat_mapping[mdl_cname], mdl_cname)]
trg_r = None
for col in aln:
if col[0] != '-' and col[1] != '-':
if col.GetResidue(1).GetNumber() == r.GetNumber():
trg_r = col.GetResidue(0)
break
mdl_cname = r.GetChain().GetName()
if mdl_cname in flat_mapping:
aln = self.mapping.alns[(flat_mapping[mdl_cname], mdl_cname)]
for col in aln:
if col[0] != '-' and col[1] != '-':
if col.GetResidue(1).GetNumber() == r.GetNumber():
trg_r = col.GetResidue(0)
break
if trg_r is not None:
trg_patch_one.AddResidue(trg_r.handle,
mol.ViewAddFlag.INCLUDE_ALL)
......@@ -1152,14 +1153,15 @@ class Scorer:
trg_patch_two = self.target.CreateEmptyView()
for r in mdl_patch_two.residues:
mdl_cname = r.GetChain().GetName()
aln = self.mapping.alns[(flat_mapping[mdl_cname], mdl_cname)]
trg_r = None
for col in aln:
if col[0] != '-' and col[1] != '-':
if col.GetResidue(1).GetNumber() == r.GetNumber():
trg_r = col.GetResidue(0)
break
mdl_cname = r.GetChain().GetName()
if mdl_cname in flat_mapping:
aln = self.mapping.alns[(flat_mapping[mdl_cname], mdl_cname)]
for col in aln:
if col[0] != '-' and col[1] != '-':
if col.GetResidue(1).GetNumber() == r.GetNumber():
trg_r = col.GetResidue(0)
break
if trg_r is not None:
trg_patch_two.AddResidue(trg_r.handle,
mol.ViewAddFlag.INCLUDE_ALL)
......
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