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Scoring: Use consistent definition of n_max_naive parameter
There are two use cases for this parameter: 1) decide whether a chain mapping problem is actually solvable by naive enumeration and crash out if not 2) As a decision whether one should use naive enumeration or a heuristic approach for chain mapping. For the latter, n_max_naive meant the number of chains in the underlying structure. Now its number of possible mappings for both cases.
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- actions/ost-compare-structures 8 additions, 4 deletionsactions/ost-compare-structures
- modules/doc/actions.rst 18 additions, 6 deletionsmodules/doc/actions.rst
- modules/mol/alg/pymod/chain_mapping.py 11 additions, 11 deletionsmodules/mol/alg/pymod/chain_mapping.py
- modules/mol/alg/pymod/scoring.py 7 additions, 4 deletionsmodules/mol/alg/pymod/scoring.py
- modules/mol/alg/tests/test_chain_mapping.py 11 additions, 8 deletionsmodules/mol/alg/tests/test_chain_mapping.py
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