Valerio Mariani authored 12 years ago and Bienchen committed 12 years ago

Commited patched file by mistake

Valerio Mariani authored 12 years ago and Bienchen committed 12 years ago

Thanks Tobias for diagnosing the problem

Valerio Mariani authored 12 years ago and Bienchen committed 12 years ago

distance to check

Up until Python 2.6, MacOS X systems were detected as 32 bit
platforms. Now, they are detected as 64bit systems. This
caused sys.path to be wrong and the ost module could not
be imported

Commited patched file by mistake

Thanks Tobias for diagnosing the problem

On some old versions of Boost.Python, std::out_of_range
is not properly converted to IndexError. Instead, a
RuntimeError is raised. For these versions, we overwrite
the IndexError type with the type of the exception
raised by geom.Vec2()[3].

The code becomes much simpler, cleaner and fixes as weird crash
with Qt 4.8

Added BLOSUM 45,80 and 100. The data for all matrices
(including BLOSUM62) originates from the matlab blosum()
function.

in the structure_analysis.py module.

This is used to make functions written at the CoordFrame level
accesible to analyze both entities and trajectories.

changed unit tests for image handle to reflect changes in observer, which now retains an internal reference to the observed image

Non-error output of lddt all to stdout
Removed from usage text an option that has been removed from the program