- Jan 25, 2024
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Bienchen authored
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Studer Gabriel authored
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Studer Gabriel authored
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Bienchen authored
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Xavier Robin authored
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Xavier Robin authored
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Bienchen authored
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- Jan 24, 2024
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Studer Gabriel authored
Information from https://www.iucr.org/resources/cif/spec/version1.1/cifsyntax
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Studer Gabriel authored
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Studer Gabriel authored
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Studer Gabriel authored
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Studer Gabriel authored
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- Jan 23, 2024
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Studer Gabriel authored
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Bienchen authored
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Bienchen authored
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Studer Gabriel authored
Available as MMCifEntityDesc objects in MMCifInfo
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Bienchen authored
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Xavier Robin authored
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- Jan 22, 2024
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Studer Gabriel authored
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- Jan 21, 2024
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Studer Gabriel authored
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Studer Gabriel authored
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Studer Gabriel authored
If all residues in a chain are saccharides in some form, the respective _entity.type should be "branched"
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Studer Gabriel authored
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- Jan 17, 2024
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Studer Gabriel authored
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- Jan 12, 2024
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Studer Gabriel authored
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- Jan 11, 2024
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Studer Gabriel authored
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Studer Gabriel authored
Minimum length for a chain in the target structure to be considered in chain mapping. The chain mapping algorithm first performs an all vs. all pairwise sequence alignment to identify "equal" chains within the target structure. We go for simple sequence identity there. Short sequences can be problematic as they may produce high sequence identity alignments by pure chance. BUT: if you're scoring peptides or short nucleotides, you really want to be able to reduce the default thresholds (pep: 10, nuc: 4)
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Bienchen authored
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- Jan 10, 2024
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Studer Gabriel authored
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Studer Gabriel authored
Right now there is only a static constructor for polymer entities
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- Jan 09, 2024
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Studer Gabriel authored
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Studer Gabriel authored
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Studer Gabriel authored
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Studer Gabriel authored
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Studer Gabriel authored
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- Jan 08, 2024
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Xavier Robin authored
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Studer Gabriel authored
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Studer Gabriel authored
uint8_t got interpreted as char, it's integer now
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- Jan 05, 2024
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Studer Gabriel authored
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