Delete run_pipeline.sh

run_pipeline.sh

-# set -e
-
-mkdir -p test/logs/cluster_log
-mkdir -p test/logs/local_log
-
-snakemake \
--p \
--s Snakefile \
---use-singularity \
---singularity-args "--no-home --bind ${PWD},/scicore/home/zavolan/devagy74/projects/filter-anno/" \
---cores 256 \
---local-cores 10 \
---rerun-incomplete \
---configfile config.yaml \
---jobscript jobscript.sh \
---cluster-config cluster.json \
---cluster "sbatch \
-	--cpus-per-task={cluster.threads} \
-	--mem={cluster.mem} \
-	--qos={cluster.queue} \
-	--time={cluster.time} \
-	-o {params.cluster_log} \
-	-p scicore \
-	--export=JOB_NAME={rule} \
-	--open-mode=append"
\ No newline at end of file