Skip to content
Snippets Groups Projects
Commit cb798009 authored by Iris Mestres Pascual's avatar Iris Mestres Pascual
Browse files

chore: remove deprecated DAG

parent a2f72631
Branches
No related tags found
No related merge requests found
Hide whitespace changes
Inline Side-by-side
images/workflow_dag_map.svg deleted 100644 → 0
+ 0
− 387
View file @ a2f72631
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN"
"http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
<!-- Generated by graphviz version 2.40.1 (20161225.0304)
-->
<!-- Title: snakemake_dag Pages: 1 -->
<svg width="646pt" height="1489pt"
viewBox="0.00 0.00 646.00 1489.00" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 1485)">
<title>snakemake_dag</title>
<polygon fill="#ffffff" stroke="transparent" points="-4,4 -4,-1485 642,-1485 642,4 -4,4"/>
<!-- 0 -->
<g id="node1" class="node">
<title>0</title>
<path fill="none" stroke="#c6d856" stroke-width="2" stroke-dasharray="5,2" d="M356,-36C356,-36 326,-36 326,-36 320,-36 314,-30 314,-24 314,-24 314,-12 314,-12 314,-6 320,0 326,0 326,0 356,0 356,0 362,0 368,-6 368,-12 368,-12 368,-24 368,-24 368,-30 362,-36 356,-36"/>
<text text-anchor="middle" x="341" y="-15.5" font-family="sans" font-size="10.00" fill="#000000">finish</text>
</g>
<!-- 1 -->
<g id="node2" class="node">
<title>1</title>
<path fill="none" stroke="#5663d8" stroke-width="2" stroke-dasharray="5,2" d="M364.5,-108C364.5,-108 317.5,-108 317.5,-108 311.5,-108 305.5,-102 305.5,-96 305.5,-96 305.5,-84 305.5,-84 305.5,-78 311.5,-72 317.5,-72 317.5,-72 364.5,-72 364.5,-72 370.5,-72 376.5,-78 376.5,-84 376.5,-84 376.5,-96 376.5,-96 376.5,-102 370.5,-108 364.5,-108"/>
<text text-anchor="middle" x="341" y="-87.5" font-family="sans" font-size="10.00" fill="#000000">index_bam</text>
</g>
<!-- 1&#45;&gt;0 -->
<g id="edge1" class="edge">
<title>1&#45;&gt;0</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M341,-71.8314C341,-64.131 341,-54.9743 341,-46.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="344.5001,-46.4132 341,-36.4133 337.5001,-46.4133 344.5001,-46.4132"/>
</g>
<!-- 2 -->
<g id="node3" class="node">
<title>2</title>
<path fill="none" stroke="#56d873" stroke-width="2" stroke-dasharray="5,2" d="M377.5,-180C377.5,-180 304.5,-180 304.5,-180 298.5,-180 292.5,-174 292.5,-168 292.5,-168 292.5,-156 292.5,-156 292.5,-150 298.5,-144 304.5,-144 304.5,-144 377.5,-144 377.5,-144 383.5,-144 389.5,-150 389.5,-156 389.5,-156 389.5,-168 389.5,-168 389.5,-174 383.5,-180 377.5,-180"/>
<text text-anchor="middle" x="341" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">sort_by_position</text>
</g>
<!-- 2&#45;&gt;1 -->
<g id="edge2" class="edge">
<title>2&#45;&gt;1</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M341,-143.8314C341,-136.131 341,-126.9743 341,-118.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="344.5001,-118.4132 341,-108.4133 337.5001,-118.4133 344.5001,-118.4132"/>
</g>
<!-- 3 -->
<g id="node4" class="node">
<title>3</title>
<path fill="none" stroke="#56b9d8" stroke-width="2" stroke-dasharray="5,2" d="M376.5,-252C376.5,-252 305.5,-252 305.5,-252 299.5,-252 293.5,-246 293.5,-240 293.5,-240 293.5,-228 293.5,-228 293.5,-222 299.5,-216 305.5,-216 305.5,-216 376.5,-216 376.5,-216 382.5,-216 388.5,-222 388.5,-228 388.5,-228 388.5,-240 388.5,-240 388.5,-246 382.5,-252 376.5,-252"/>
<text text-anchor="middle" x="341" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">convert_to_bam</text>
</g>
<!-- 3&#45;&gt;2 -->
<g id="edge3" class="edge">
<title>3&#45;&gt;2</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M341,-215.8314C341,-208.131 341,-198.9743 341,-190.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="344.5001,-190.4132 341,-180.4133 337.5001,-190.4133 344.5001,-190.4132"/>
</g>
<!-- 4 -->
<g id="node5" class="node">
<title>4</title>
<path fill="none" stroke="#568ad8" stroke-width="2" stroke-dasharray="5,2" d="M379.5,-324C379.5,-324 302.5,-324 302.5,-324 296.5,-324 290.5,-318 290.5,-312 290.5,-312 290.5,-300 290.5,-300 290.5,-294 296.5,-288 302.5,-288 302.5,-288 379.5,-288 379.5,-288 385.5,-288 391.5,-294 391.5,-300 391.5,-300 391.5,-312 391.5,-312 391.5,-318 385.5,-324 379.5,-324"/>
<text text-anchor="middle" x="341" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">uncollapse_reads</text>
</g>
<!-- 4&#45;&gt;3 -->
<g id="edge4" class="edge">
<title>4&#45;&gt;3</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M341,-287.8314C341,-280.131 341,-270.9743 341,-262.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="344.5001,-262.4132 341,-252.4133 337.5001,-262.4133 344.5001,-262.4132"/>
</g>
<!-- 5 -->
<g id="node6" class="node">
<title>5</title>
<path fill="none" stroke="#56d892" stroke-width="2" stroke-dasharray="5,2" d="M379,-396C379,-396 303,-396 303,-396 297,-396 291,-390 291,-384 291,-384 291,-372 291,-372 291,-366 297,-360 303,-360 303,-360 379,-360 379,-360 385,-360 391,-366 391,-372 391,-372 391,-384 391,-384 391,-390 385,-396 379,-396"/>
<text text-anchor="middle" x="341" y="-375.5" font-family="sans" font-size="10.00" fill="#000000">remove_inferiors</text>
</g>
<!-- 5&#45;&gt;4 -->
<g id="edge5" class="edge">
<title>5&#45;&gt;4</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M341,-359.8314C341,-352.131 341,-342.9743 341,-334.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="344.5001,-334.4132 341,-324.4133 337.5001,-334.4133 344.5001,-334.4132"/>
</g>
<!-- 6 -->
<g id="node7" class="node">
<title>6</title>
<path fill="none" stroke="#d6d856" stroke-width="2" stroke-dasharray="5,2" d="M356,-468C356,-468 326,-468 326,-468 320,-468 314,-462 314,-456 314,-456 314,-444 314,-444 314,-438 320,-432 326,-432 326,-432 356,-432 356,-432 362,-432 368,-438 368,-444 368,-444 368,-456 368,-456 368,-462 362,-468 356,-468"/>
<text text-anchor="middle" x="341" y="-447.5" font-family="sans" font-size="10.00" fill="#000000">sort_id</text>
</g>
<!-- 6&#45;&gt;5 -->
<g id="edge6" class="edge">
<title>6&#45;&gt;5</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M341,-431.8314C341,-424.131 341,-414.9743 341,-406.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="344.5001,-406.4132 341,-396.4133 337.5001,-406.4133 344.5001,-406.4132"/>
</g>
<!-- 7 -->
<g id="node8" class="node">
<title>7</title>
<path fill="none" stroke="#56c9d8" stroke-width="2" stroke-dasharray="5,2" d="M366,-540C366,-540 316,-540 316,-540 310,-540 304,-534 304,-528 304,-528 304,-516 304,-516 304,-510 310,-504 316,-504 316,-504 366,-504 366,-504 372,-504 378,-510 378,-516 378,-516 378,-528 378,-528 378,-534 372,-540 366,-540"/>
<text text-anchor="middle" x="341" y="-519.5" font-family="sans" font-size="10.00" fill="#000000">add_header</text>
</g>
<!-- 7&#45;&gt;6 -->
<g id="edge7" class="edge">
<title>7&#45;&gt;6</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M341,-503.8314C341,-496.131 341,-486.9743 341,-478.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="344.5001,-478.4132 341,-468.4133 337.5001,-478.4133 344.5001,-478.4132"/>
</g>
<!-- 8 -->
<g id="node9" class="node">
<title>8</title>
<path fill="none" stroke="#567bd8" stroke-width="2" stroke-dasharray="5,2" d="M369,-612C369,-612 313,-612 313,-612 307,-612 301,-606 301,-600 301,-600 301,-588 301,-588 301,-582 307,-576 313,-576 313,-576 369,-576 369,-576 375,-576 381,-582 381,-588 381,-588 381,-600 381,-600 381,-606 375,-612 369,-612"/>
<text text-anchor="middle" x="341" y="-591.5" font-family="sans" font-size="10.00" fill="#000000">cat_mapping</text>
</g>
<!-- 8&#45;&gt;7 -->
<g id="edge8" class="edge">
<title>8&#45;&gt;7</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M341,-575.8314C341,-568.131 341,-558.9743 341,-550.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="344.5001,-550.4132 341,-540.4133 337.5001,-550.4133 344.5001,-550.4132"/>
</g>
<!-- 9 -->
<g id="node10" class="node">
<title>9</title>
<path fill="none" stroke="#d88556" stroke-width="2" stroke-dasharray="5,2" d="M304,-684C304,-684 248,-684 248,-684 242,-684 236,-678 236,-672 236,-672 236,-660 236,-660 236,-654 242,-648 248,-648 248,-648 304,-648 304,-648 310,-648 316,-654 316,-660 316,-660 316,-672 316,-672 316,-678 310,-684 304,-684"/>
<text text-anchor="middle" x="276" y="-663.5" font-family="sans" font-size="10.00" fill="#000000">trans_to_gen</text>
</g>
<!-- 9&#45;&gt;8 -->
<g id="edge9" class="edge">
<title>9&#45;&gt;8</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M292.4022,-647.8314C300.0415,-639.3694 309.2683,-629.1489 317.6207,-619.8971"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="320.2738,-622.1813 324.3769,-612.4133 315.0779,-617.4906 320.2738,-622.1813"/>
</g>
<!-- 10 -->
<g id="node11" class="node">
<title>10</title>
<path fill="none" stroke="#56d8c1" stroke-width="2" stroke-dasharray="5,2" d="M349,-756C349,-756 201,-756 201,-756 195,-756 189,-750 189,-744 189,-744 189,-732 189,-732 189,-726 195,-720 201,-720 201,-720 349,-720 349,-720 355,-720 361,-726 361,-732 361,-732 361,-744 361,-744 361,-750 355,-756 349,-756"/>
<text text-anchor="middle" x="275" y="-735.5" font-family="sans" font-size="10.00" fill="#000000">remove_headers_transcriptome</text>
</g>
<!-- 10&#45;&gt;9 -->
<g id="edge11" class="edge">
<title>10&#45;&gt;9</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M275.2523,-719.8314C275.3593,-712.131 275.4865,-702.9743 275.6053,-694.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="279.1049,-694.4609 275.7443,-684.4133 272.1056,-694.3637 279.1049,-694.4609"/>
</g>
<!-- 11 -->
<g id="node12" class="node">
<title>11</title>
<path fill="none" stroke="#569ad8" stroke-width="2" stroke-dasharray="5,2" d="M326,-828C326,-828 220,-828 220,-828 214,-828 208,-822 208,-816 208,-816 208,-804 208,-804 208,-798 214,-792 220,-792 220,-792 326,-792 326,-792 332,-792 338,-798 338,-804 338,-804 338,-816 338,-816 338,-822 332,-828 326,-828"/>
<text text-anchor="middle" x="273" y="-807.5" font-family="sans" font-size="10.00" fill="#000000">filter_nh_transcriptome</text>
</g>
<!-- 11&#45;&gt;10 -->
<g id="edge12" class="edge">
<title>11&#45;&gt;10</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M273.5047,-791.8314C273.7186,-784.131 273.9729,-774.9743 274.2106,-766.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="277.7094,-766.5066 274.4885,-756.4133 270.7121,-766.3122 277.7094,-766.5066"/>
</g>
<!-- 12 -->
<g id="node13" class="node">
<title>12</title>
<path fill="none" stroke="#8fd856" stroke-width="2" stroke-dasharray="5,2" d="M317,-900C317,-900 187,-900 187,-900 181,-900 175,-894 175,-888 175,-888 175,-876 175,-876 175,-870 181,-864 187,-864 187,-864 317,-864 317,-864 323,-864 329,-870 329,-876 329,-876 329,-888 329,-888 329,-894 323,-900 317,-900"/>
<text text-anchor="middle" x="252" y="-879.5" font-family="sans" font-size="10.00" fill="#000000">merge_transcriptome_maps</text>
</g>
<!-- 12&#45;&gt;11 -->
<g id="edge13" class="edge">
<title>12&#45;&gt;11</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M257.2992,-863.8314C259.5698,-856.0463 262.2746,-846.7729 264.794,-838.1347"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="268.1894,-838.9933 267.6295,-828.4133 261.4694,-837.0332 268.1894,-838.9933"/>
</g>
<!-- 13 -->
<g id="node14" class="node">
<title>13</title>
<path fill="none" stroke="#80d856" stroke-width="2" stroke-dasharray="5,2" d="M174,-1116C174,-1116 12,-1116 12,-1116 6,-1116 0,-1110 0,-1104 0,-1104 0,-1092 0,-1092 0,-1086 6,-1080 12,-1080 12,-1080 174,-1080 174,-1080 180,-1080 186,-1086 186,-1092 186,-1092 186,-1104 186,-1104 186,-1110 180,-1116 174,-1116"/>
<text text-anchor="middle" x="93" y="-1095.5" font-family="sans" font-size="10.00" fill="#000000">mapping_transcriptome_segemehl</text>
</g>
<!-- 13&#45;&gt;12 -->
<g id="edge14" class="edge">
<title>13&#45;&gt;12</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M96.0562,-1079.8994C102.321,-1047.6053 119.327,-979.3819 157,-936 168.0222,-923.3075 182.7958,-912.932 197.4032,-904.7901"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="199.2392,-907.7785 206.442,-900.0086 195.9659,-901.5909 199.2392,-907.7785"/>
</g>
<!-- 14 -->
<g id="node15" class="node">
<title>14</title>
<path fill="none" stroke="#61d856" stroke-width="2" stroke-dasharray="5,2" d="M361.5,-1260C361.5,-1260 294.5,-1260 294.5,-1260 288.5,-1260 282.5,-1254 282.5,-1248 282.5,-1248 282.5,-1236 282.5,-1236 282.5,-1230 288.5,-1224 294.5,-1224 294.5,-1224 361.5,-1224 361.5,-1224 367.5,-1224 373.5,-1230 373.5,-1236 373.5,-1236 373.5,-1248 373.5,-1248 373.5,-1254 367.5,-1260 361.5,-1260"/>
<text text-anchor="middle" x="328" y="-1239.5" font-family="sans" font-size="10.00" fill="#000000">fastx_collapser</text>
</g>
<!-- 14&#45;&gt;13 -->
<g id="edge16" class="edge">
<title>14&#45;&gt;13</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M298.2371,-1223.7623C255.7707,-1197.7404 177.7809,-1149.9508 131.1322,-1121.3661"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="132.8765,-1118.3301 122.5213,-1116.0896 129.2191,-1124.2987 132.8765,-1118.3301"/>
</g>
<!-- 20 -->
<g id="node21" class="node">
<title>20</title>
<path fill="none" stroke="#d89c56" stroke-width="2" stroke-dasharray="5,2" d="M385.5,-1188C385.5,-1188 270.5,-1188 270.5,-1188 264.5,-1188 258.5,-1182 258.5,-1176 258.5,-1176 258.5,-1164 258.5,-1164 258.5,-1158 264.5,-1152 270.5,-1152 270.5,-1152 385.5,-1152 385.5,-1152 391.5,-1152 397.5,-1158 397.5,-1164 397.5,-1164 397.5,-1176 397.5,-1176 397.5,-1182 391.5,-1188 385.5,-1188"/>
<text text-anchor="middle" x="328" y="-1167.5" font-family="sans" font-size="10.00" fill="#000000">filter_fasta_for_oligomap</text>
</g>
<!-- 14&#45;&gt;20 -->
<g id="edge23" class="edge">
<title>14&#45;&gt;20</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M328,-1223.8314C328,-1216.131 328,-1206.9743 328,-1198.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="331.5001,-1198.4132 328,-1188.4133 324.5001,-1198.4133 331.5001,-1198.4132"/>
</g>
<!-- 25 -->
<g id="node26" class="node">
<title>25</title>
<path fill="none" stroke="#56a9d8" stroke-width="2" stroke-dasharray="5,2" d="M626,-1188C626,-1188 492,-1188 492,-1188 486,-1188 480,-1182 480,-1176 480,-1176 480,-1164 480,-1164 480,-1158 486,-1152 492,-1152 492,-1152 626,-1152 626,-1152 632,-1152 638,-1158 638,-1164 638,-1164 638,-1176 638,-1176 638,-1182 632,-1188 626,-1188"/>
<text text-anchor="middle" x="559" y="-1167.5" font-family="sans" font-size="10.00" fill="#000000">mapping_genome_segemehl</text>
</g>
<!-- 14&#45;&gt;25 -->
<g id="edge29" class="edge">
<title>14&#45;&gt;25</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M373.6382,-1227.7751C407.1926,-1217.3166 453.3477,-1202.9306 491.2064,-1191.1305"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="492.6366,-1194.3509 501.1421,-1188.0336 490.5535,-1187.6679 492.6366,-1194.3509"/>
</g>
<!-- 15 -->
<g id="node16" class="node">
<title>15</title>
<path fill="none" stroke="#d8ac56" stroke-width="2" stroke-dasharray="5,2" d="M345.5,-1332C345.5,-1332 310.5,-1332 310.5,-1332 304.5,-1332 298.5,-1326 298.5,-1320 298.5,-1320 298.5,-1308 298.5,-1308 298.5,-1302 304.5,-1296 310.5,-1296 310.5,-1296 345.5,-1296 345.5,-1296 351.5,-1296 357.5,-1302 357.5,-1308 357.5,-1308 357.5,-1320 357.5,-1320 357.5,-1326 351.5,-1332 345.5,-1332"/>
<text text-anchor="middle" x="328" y="-1311.5" font-family="sans" font-size="10.00" fill="#000000">cutadapt</text>
</g>
<!-- 15&#45;&gt;14 -->
<g id="edge17" class="edge">
<title>15&#45;&gt;14</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M328,-1295.8314C328,-1288.131 328,-1278.9743 328,-1270.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="331.5001,-1270.4132 328,-1260.4133 324.5001,-1270.4133 331.5001,-1270.4132"/>
</g>
<!-- 16 -->
<g id="node17" class="node">
<title>16</title>
<path fill="none" stroke="#d86656" stroke-width="2" stroke-dasharray="5,2" d="M362.5,-1404C362.5,-1404 293.5,-1404 293.5,-1404 287.5,-1404 281.5,-1398 281.5,-1392 281.5,-1392 281.5,-1380 281.5,-1380 281.5,-1374 287.5,-1368 293.5,-1368 293.5,-1368 362.5,-1368 362.5,-1368 368.5,-1368 374.5,-1374 374.5,-1380 374.5,-1380 374.5,-1392 374.5,-1392 374.5,-1398 368.5,-1404 362.5,-1404"/>
<text text-anchor="middle" x="328" y="-1383.5" font-family="sans" font-size="10.00" fill="#000000">fasta_formatter</text>
</g>
<!-- 16&#45;&gt;15 -->
<g id="edge18" class="edge">
<title>16&#45;&gt;15</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M328,-1367.8314C328,-1360.131 328,-1350.9743 328,-1342.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="331.5001,-1342.4132 328,-1332.4133 324.5001,-1342.4133 331.5001,-1342.4132"/>
</g>
<!-- 17 -->
<g id="node18" class="node">
<title>17</title>
<path fill="none" stroke="#afd856" stroke-width="2" stroke-dasharray="5,2" d="M385.5,-1481C385.5,-1481 270.5,-1481 270.5,-1481 264.5,-1481 258.5,-1475 258.5,-1469 258.5,-1469 258.5,-1452 258.5,-1452 258.5,-1446 264.5,-1440 270.5,-1440 270.5,-1440 385.5,-1440 385.5,-1440 391.5,-1440 397.5,-1446 397.5,-1452 397.5,-1452 397.5,-1469 397.5,-1469 397.5,-1475 391.5,-1481 385.5,-1481"/>
<text text-anchor="middle" x="328" y="-1469" font-family="sans" font-size="10.00" fill="#000000">uncompress_zipped_files</text>
<text text-anchor="middle" x="328" y="-1458" font-family="sans" font-size="10.00" fill="#000000">format: fa</text>
<text text-anchor="middle" x="328" y="-1447" font-family="sans" font-size="10.00" fill="#000000">sample: test_lib</text>
</g>
<!-- 17&#45;&gt;16 -->
<g id="edge19" class="edge">
<title>17&#45;&gt;16</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M328,-1439.7476C328,-1431.8767 328,-1422.7743 328,-1414.3232"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="331.5001,-1414.1086 328,-1404.1087 324.5001,-1414.1087 331.5001,-1414.1086"/>
</g>
<!-- 18 -->
<g id="node19" class="node">
<title>18</title>
<path fill="none" stroke="#56d85b" stroke-width="2" stroke-dasharray="5,2" d="M326,-972C326,-972 178,-972 178,-972 172,-972 166,-966 166,-960 166,-960 166,-948 166,-948 166,-942 172,-936 178,-936 178,-936 326,-936 326,-936 332,-936 338,-942 338,-948 338,-948 338,-960 338,-960 338,-966 332,-972 326,-972"/>
<text text-anchor="middle" x="252" y="-951.5" font-family="sans" font-size="10.00" fill="#000000">oligomap_transcriptome_toSAM</text>
</g>
<!-- 18&#45;&gt;12 -->
<g id="edge15" class="edge">
<title>18&#45;&gt;12</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M252,-935.8314C252,-928.131 252,-918.9743 252,-910.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="255.5001,-910.4132 252,-900.4133 248.5001,-910.4133 255.5001,-910.4132"/>
</g>
<!-- 19 -->
<g id="node20" class="node">
<title>19</title>
<path fill="none" stroke="#d85656" stroke-width="2" stroke-dasharray="5,2" d="M376,-1116C376,-1116 216,-1116 216,-1116 210,-1116 204,-1110 204,-1104 204,-1104 204,-1092 204,-1092 204,-1086 210,-1080 216,-1080 216,-1080 376,-1080 376,-1080 382,-1080 388,-1086 388,-1092 388,-1092 388,-1104 388,-1104 388,-1110 382,-1116 376,-1116"/>
<text text-anchor="middle" x="296" y="-1095.5" font-family="sans" font-size="10.00" fill="#000000">mapping_transcriptome_oligomap</text>
</g>
<!-- 19&#45;&gt;18 -->
<g id="edge20" class="edge">
<title>19&#45;&gt;18</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M246.4713,-1079.9463C230.6746,-1071.5649 214.9778,-1059.8565 206,-1044 193.896,-1022.6221 208.7881,-997.7098 224.7693,-979.5223"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="227.3609,-981.8751 231.6095,-972.1694 222.2357,-977.1072 227.3609,-981.8751"/>
</g>
<!-- 21 -->
<g id="node22" class="node">
<title>21</title>
<path fill="none" stroke="#d8cb56" stroke-width="2" stroke-dasharray="5,2" d="M363,-1044C363,-1044 227,-1044 227,-1044 221,-1044 215,-1038 215,-1032 215,-1032 215,-1020 215,-1020 215,-1014 221,-1008 227,-1008 227,-1008 363,-1008 363,-1008 369,-1008 375,-1014 375,-1020 375,-1020 375,-1032 375,-1032 375,-1038 369,-1044 363,-1044"/>
<text text-anchor="middle" x="295" y="-1023.5" font-family="sans" font-size="10.00" fill="#000000">sort_transcriptome_oligomap</text>
</g>
<!-- 19&#45;&gt;21 -->
<g id="edge24" class="edge">
<title>19&#45;&gt;21</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M295.7477,-1079.8314C295.6407,-1072.131 295.5135,-1062.9743 295.3947,-1054.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="298.8944,-1054.3637 295.2557,-1044.4133 291.8951,-1054.4609 298.8944,-1054.3637"/>
</g>
<!-- 20&#45;&gt;19 -->
<g id="edge22" class="edge">
<title>20&#45;&gt;19</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M319.925,-1151.8314C316.3898,-1143.8771 312.164,-1134.369 308.2544,-1125.5723"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="311.4435,-1124.1299 304.1837,-1116.4133 305.0468,-1126.9729 311.4435,-1124.1299"/>
</g>
<!-- 27 -->
<g id="node28" class="node">
<title>27</title>
<path fill="none" stroke="#56d8d0" stroke-width="2" stroke-dasharray="5,2" d="M549.5,-1116C549.5,-1116 418.5,-1116 418.5,-1116 412.5,-1116 406.5,-1110 406.5,-1104 406.5,-1104 406.5,-1092 406.5,-1092 406.5,-1086 412.5,-1080 418.5,-1080 418.5,-1080 549.5,-1080 549.5,-1080 555.5,-1080 561.5,-1086 561.5,-1092 561.5,-1092 561.5,-1104 561.5,-1104 561.5,-1110 555.5,-1116 549.5,-1116"/>
<text text-anchor="middle" x="484" y="-1095.5" font-family="sans" font-size="10.00" fill="#000000">mapping_genome_oligomap</text>
</g>
<!-- 20&#45;&gt;27 -->
<g id="edge32" class="edge">
<title>20&#45;&gt;27</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M367.3654,-1151.8314C388.1367,-1142.2446 413.7983,-1130.4008 435.7581,-1120.2655"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="437.3048,-1123.4065 444.9177,-1116.038 434.3714,-1117.0508 437.3048,-1123.4065"/>
</g>
<!-- 21&#45;&gt;18 -->
<g id="edge21" class="edge">
<title>21&#45;&gt;18</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M284.1493,-1007.8314C279.2977,-999.7079 273.4783,-989.9637 268.132,-981.0118"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="271.1292,-979.2041 262.9968,-972.4133 265.1194,-982.7933 271.1292,-979.2041"/>
</g>
<!-- 22 -->
<g id="node23" class="node">
<title>22</title>
<path fill="none" stroke="#56d8b1" stroke-width="2" stroke-dasharray="5,2" d="M465.5,-684C465.5,-684 346.5,-684 346.5,-684 340.5,-684 334.5,-678 334.5,-672 334.5,-672 334.5,-660 334.5,-660 334.5,-654 340.5,-648 346.5,-648 346.5,-648 465.5,-648 465.5,-648 471.5,-648 477.5,-654 477.5,-660 477.5,-660 477.5,-672 477.5,-672 477.5,-678 471.5,-684 465.5,-684"/>
<text text-anchor="middle" x="406" y="-663.5" font-family="sans" font-size="10.00" fill="#000000">remove_headers_genome</text>
</g>
<!-- 22&#45;&gt;8 -->
<g id="edge10" class="edge">
<title>22&#45;&gt;8</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M389.5978,-647.8314C381.9585,-639.3694 372.7317,-629.1489 364.3793,-619.8971"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="366.9221,-617.4906 357.6231,-612.4133 361.7262,-622.1813 366.9221,-617.4906"/>
</g>
<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
<path fill="none" stroke="#d87556" stroke-width="2" stroke-dasharray="5,2" d="M455.5,-828C455.5,-828 378.5,-828 378.5,-828 372.5,-828 366.5,-822 366.5,-816 366.5,-816 366.5,-804 366.5,-804 366.5,-798 372.5,-792 378.5,-792 378.5,-792 455.5,-792 455.5,-792 461.5,-792 467.5,-798 467.5,-804 467.5,-804 467.5,-816 467.5,-816 467.5,-822 461.5,-828 455.5,-828"/>
<text text-anchor="middle" x="417" y="-807.5" font-family="sans" font-size="10.00" fill="#000000">nh_filter_genome</text>
</g>
<!-- 23&#45;&gt;22 -->
<g id="edge25" class="edge">
<title>23&#45;&gt;22</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M415.6068,-791.7623C413.7306,-767.201 410.3731,-723.2474 408.1659,-694.3541"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="411.6334,-693.794 407.3818,-684.0896 404.6538,-694.3272 411.6334,-693.794"/>
</g>
<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
<path fill="none" stroke="#56d8a2" stroke-width="2" stroke-dasharray="5,2" d="M496.5,-900C496.5,-900 395.5,-900 395.5,-900 389.5,-900 383.5,-894 383.5,-888 383.5,-888 383.5,-876 383.5,-876 383.5,-870 389.5,-864 395.5,-864 395.5,-864 496.5,-864 496.5,-864 502.5,-864 508.5,-870 508.5,-876 508.5,-876 508.5,-888 508.5,-888 508.5,-894 502.5,-900 496.5,-900"/>
<text text-anchor="middle" x="446" y="-879.5" font-family="sans" font-size="10.00" fill="#000000">merge_genome_maps</text>
</g>
<!-- 24&#45;&gt;23 -->
<g id="edge26" class="edge">
<title>24&#45;&gt;23</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M438.6821,-863.8314C435.5124,-855.9617 431.73,-846.5712 428.2187,-837.8533"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="431.3992,-836.3815 424.4165,-828.4133 424.9061,-838.9968 431.3992,-836.3815"/>
</g>
<!-- 25&#45;&gt;24 -->
<g id="edge27" class="edge">
<title>25&#45;&gt;24</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M564.4447,-1151.5968C572.5737,-1121.0938 585.4612,-1058.4231 571,-1008 560.5969,-971.7264 552.2103,-963.1481 526,-936 515.0304,-924.6379 501.2945,-914.3226 488.316,-905.8234"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="489.8165,-902.6309 479.4952,-900.239 486.0721,-908.5453 489.8165,-902.6309"/>
</g>
<!-- 26 -->
<g id="node27" class="node">
<title>26</title>
<path fill="none" stroke="#70d856" stroke-width="2" stroke-dasharray="5,2" d="M505.5,-972C505.5,-972 386.5,-972 386.5,-972 380.5,-972 374.5,-966 374.5,-960 374.5,-960 374.5,-948 374.5,-948 374.5,-942 380.5,-936 386.5,-936 386.5,-936 505.5,-936 505.5,-936 511.5,-936 517.5,-942 517.5,-948 517.5,-948 517.5,-960 517.5,-960 517.5,-966 511.5,-972 505.5,-972"/>
<text text-anchor="middle" x="446" y="-951.5" font-family="sans" font-size="10.00" fill="#000000">oligomap_genome_toSAM</text>
</g>
<!-- 26&#45;&gt;24 -->
<g id="edge28" class="edge">
<title>26&#45;&gt;24</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M446,-935.8314C446,-928.131 446,-918.9743 446,-910.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="449.5001,-910.4132 446,-900.4133 442.5001,-910.4133 449.5001,-910.4132"/>
</g>
<!-- 27&#45;&gt;26 -->
<g id="edge30" class="edge">
<title>27&#45;&gt;26</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M453.5042,-1079.7757C441.3178,-1070.7056 428.6228,-1058.5508 422,-1044 412.8156,-1023.8211 420.3523,-999.4424 429.3342,-981.15"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="432.4908,-982.6682 434.082,-972.1935 426.306,-979.3896 432.4908,-982.6682"/>
</g>
<!-- 28 -->
<g id="node29" class="node">
<title>28</title>
<path fill="none" stroke="#9fd856" stroke-width="2" stroke-dasharray="5,2" d="M550.5,-1044C550.5,-1044 443.5,-1044 443.5,-1044 437.5,-1044 431.5,-1038 431.5,-1032 431.5,-1032 431.5,-1020 431.5,-1020 431.5,-1014 437.5,-1008 443.5,-1008 443.5,-1008 550.5,-1008 550.5,-1008 556.5,-1008 562.5,-1014 562.5,-1020 562.5,-1020 562.5,-1032 562.5,-1032 562.5,-1038 556.5,-1044 550.5,-1044"/>
<text text-anchor="middle" x="497" y="-1023.5" font-family="sans" font-size="10.00" fill="#000000">sort_genome_oligomap</text>
</g>
<!-- 27&#45;&gt;28 -->
<g id="edge33" class="edge">
<title>27&#45;&gt;28</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M487.2804,-1079.8314C488.6708,-1072.131 490.3241,-1062.9743 491.8692,-1054.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="495.3428,-1054.8761 493.6754,-1044.4133 488.4542,-1053.6322 495.3428,-1054.8761"/>
</g>
<!-- 28&#45;&gt;26 -->
<g id="edge31" class="edge">
<title>28&#45;&gt;26</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M484.1305,-1007.8314C478.3165,-999.6232 471.3304,-989.7606 464.9354,-980.7323"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="467.679,-978.5505 459.0427,-972.4133 461.9669,-982.5966 467.679,-978.5505"/>
</g>
</g>
</svg>
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment