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Created with Raphaël 2.2.07Mar54320Feb23Jan22201928Jul278728Jun2726279Aug615Apr3Jan6Oct10Sep18May26Mar2512Feb14Oct14Jun16May149Apr11Mar27Feb25181587624Jan23docs: add GitHub migration notedevdevdocs: update README.md39-sync-documen…39-sync-documentationdocs: update DAG and rule graphstyle: remove final underscore on the graph namechore: remove deprecated DAGchore: remove deprecated DAGchore: remove deprecated DAGchore: remove deprecated rule graphchore: remove deprecated rule graphchore: remove deprecated rule graphchore: remove template RUNS/ directoryrefactor: use local files27-specifying-l…27-specifying-local-filesrefactor: use local annotation filerefactor: use local genome filefix: fix line to remove snakemake reportRefactor Snakefile to use local filesRefactor Snakefile to use local filesChange to use local filesChange to use local filesAdd miRNA annotation fileAdd gene annotation fileAdd genome fasta fileChange URLS to local filesAdd ucsc-ensembl mappings fileChange URLS to local filesfeat: simplify configchore: remove unused config fileAdd rule to sort isomiRs annotation file34-use-local-fi…34-use-local-filesAdd rule to create pre-miRNA annotation fileAddition of the pre-miRNA annotation fileAddition of the pre-miRNA annotation fileRefactor code to use only local files. Create new test files using chr19.refactor: read samples from tablerefactor: merge prepare, map & quantify workflowsci: fix outdated environment namefix: increase memory for genome mappingdocs: add/extend input hintsfix: set correct path to scripts directorytest: fix Slurm submissionfix: update job script