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Commit 53bf4372 authored by BIOPZ-Gypas Foivos's avatar BIOPZ-Gypas Foivos
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Updated run_snakefile.sh

parent 100e648e
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snakemake/prepare_annotation/run_snakefile.sh
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......@@ -5,7 +5,7 @@ mkdir -p logs/local_log
snakemake \
--cluster-config cluster.json \
--cluster "sbatch --cpus-per-task={cluster.threads} --mem={cluster.mem} --qos={cluster.queue} --time={cluster.time} --output={params.cluster_log}-%j-%N -p scicore" \
--cluster "sbatch --cpus-per-task={cluster.threads} --mem={cluster.mem} --qos={cluster.queue} --time={cluster.time} --job-name={cluster.name} -o {cluster.out} -p scicore" \
--cores 256 \
-p \
--rerun-incomplete \
......
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