Skip to content

Sample expressed transcripts

Generate the "RNA content" of a single cell by sampling transcripts in proportion to the relative expression of levels of their corresponding genes (provided as input), up to a given total transcript count.

Inputs:

  1. Csv-formatted file with gene expression levels "GeneID,Count"
  2. Total number of transcripts to sample for a single cell

Output: Csv-formatted file ("GeneID,Count") with gene expression levels in a "cell"