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Draft: Count gene

Michele Garioni requested to merge count_gene into main

Issue #11 Before writing the CLI, I wanted to ask wether the method for counting the reads for each gene would work fine like I scripted it. In addition, I wanted to ask you wether you think there would be a more efficient way to do this. As of now, the function reads through the entire bam file, and it could take long for a high number of reads. Thank you!

Edited by Michele Garioni

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