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BIOPZ-Iborra de Toledo Paula
committed
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<!-- Title: snakemake_dag Pages: 1 -->
BIOPZ-Iborra de Toledo Paula
committed
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<title>snakemake_dag</title>
BIOPZ-Iborra de Toledo Paula
committed
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BIOPZ-Iborra de Toledo Paula
committed
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<title>0</title>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="node2" class="node">
<title>1</title>
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<text text-anchor="middle" x="146" y="-93" font-family="sans" font-size="10.00" fill="#000000">pe_fastqc</text>
<text text-anchor="middle" x="146" y="-82" font-family="sans" font-size="10.00" fill="#000000">sample: synthetic_10_reads_paired_synthetic_10_reads_paired</text>
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge1" class="edge">
<title>1->0</title>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="node3" class="node">
<title>2</title>
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<text text-anchor="middle" x="462" y="-93" font-family="sans" font-size="10.00" fill="#000000">fastqc</text>
<text text-anchor="middle" x="462" y="-82" font-family="sans" font-size="10.00" fill="#000000">sample: synthetic_10_reads_mate_1_synthetic_10_reads_mate_1</text>
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge2" class="edge">
<title>2->0</title>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="node4" class="node">
<title>3</title>
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<text text-anchor="middle" x="929" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">pe_quantification_salmon</text>
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge3" class="edge">
<title>3->0</title>
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<!-- 9 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node10" class="node">
<title>9</title>
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<text text-anchor="middle" x="1248" y="-93" font-family="sans" font-size="10.00" fill="#000000">salmon_quantmerge_genes</text>
<text text-anchor="middle" x="1248" y="-82" font-family="sans" font-size="10.00" fill="#000000">salmon_merge_on: tpm</text>
</g>
<!-- 3->9 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge25" class="edge">
<title>3->9</title>
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<!-- 10 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node11" class="node">
<title>10</title>
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<text text-anchor="middle" x="743" y="-93" font-family="sans" font-size="10.00" fill="#000000">salmon_quantmerge_genes</text>
<text text-anchor="middle" x="743" y="-82" font-family="sans" font-size="10.00" fill="#000000">salmon_merge_on: numreads</text>
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<!-- 3->10 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge27" class="edge">
<title>3->10</title>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="node12" class="node">
<title>11</title>
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<text text-anchor="middle" x="911" y="-93" font-family="sans" font-size="10.00" fill="#000000">salmon_quantmerge_transcripts</text>
<text text-anchor="middle" x="911" y="-82" font-family="sans" font-size="10.00" fill="#000000">salmon_merge_on: tpm</text>
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<!-- 3->11 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge29" class="edge">
<title>3->11</title>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="node13" class="node">
<title>12</title>
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<text text-anchor="middle" x="1084" y="-93" font-family="sans" font-size="10.00" fill="#000000">salmon_quantmerge_transcripts</text>
<text text-anchor="middle" x="1084" y="-82" font-family="sans" font-size="10.00" fill="#000000">salmon_merge_on: numreads</text>
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<!-- 3->12 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge31" class="edge">
<title>3->12</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M968.113,-143.8314C988.7512,-134.2446 1014.2484,-122.4008 1036.0673,-112.2655"/>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="node5" class="node">
<title>4</title>
<path fill="none" stroke="#56b1d8" stroke-width="2" d="M1109.5,-180C1109.5,-180 1022.5,-180 1022.5,-180 1016.5,-180 1010.5,-174 1010.5,-168 1010.5,-168 1010.5,-156 1010.5,-156 1010.5,-150 1016.5,-144 1022.5,-144 1022.5,-144 1109.5,-144 1109.5,-144 1115.5,-144 1121.5,-150 1121.5,-156 1121.5,-156 1121.5,-168 1121.5,-168 1121.5,-174 1115.5,-180 1109.5,-180"/>
<text text-anchor="middle" x="1066" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">quantification_salmon</text>
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge4" class="edge">
<title>4->0</title>
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<!-- 4->9 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge26" class="edge">
<title>4->9</title>
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<!-- 4->10 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge28" class="edge">
<title>4->10</title>
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<!-- 4->11 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge30" class="edge">
<title>4->11</title>
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<!-- 4->12 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge32" class="edge">
<title>4->12</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1070.5422,-143.8314C1072.4884,-136.0463 1074.8068,-126.7729 1076.9663,-118.1347"/>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="node6" class="node">
<title>5</title>
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<text text-anchor="middle" x="1223" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">pe_genome_quantification_kallisto</text>
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<!-- 5->0 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge5" class="edge">
<title>5->0</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1306.0774,-146.1087C1326.3767,-138.1084 1345.7586,-126.081 1358,-108 1366.9701,-94.7509 1367.6615,-84.7536 1358,-72 1339.4067,-47.4559 1253.9804,-30.9519 1203.5562,-23.1627"/>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="node7" class="node">
<title>6</title>
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<text text-anchor="middle" x="1399" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">genome_quantification_kallisto</text>
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<!-- 6->0 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge6" class="edge">
<title>6->0</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1399.4933,-143.8404C1399.0194,-123.5511 1395.0299,-91.0582 1376,-72 1351.9364,-47.9006 1256.9834,-30.8919 1203.3694,-22.9895"/>
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<!-- 7 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node8" class="node">
<title>7</title>
<path fill="none" stroke="#d6d856" stroke-width="2" d="M1631,-108C1631,-108 1543,-108 1543,-108 1537,-108 1531,-102 1531,-96 1531,-96 1531,-84 1531,-84 1531,-78 1537,-72 1543,-72 1543,-72 1631,-72 1631,-72 1637,-72 1643,-78 1643,-84 1643,-84 1643,-96 1643,-96 1643,-102 1637,-108 1631,-108"/>
<text text-anchor="middle" x="1587" y="-93" font-family="sans" font-size="10.00" fill="#000000">calculate_TIN_scores</text>
<text text-anchor="middle" x="1587" y="-82" font-family="sans" font-size="10.00" fill="#000000">seqmode: paired_end</text>
</g>
<!-- 7->0 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge7" class="edge">
<title>7->0</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1530.6589,-80.3645C1443.3141,-65.4266 1277.5807,-37.0827 1203.4604,-24.4065"/>
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<!-- 8 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node9" class="node">
<title>8</title>
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<text text-anchor="middle" x="1773" y="-93" font-family="sans" font-size="10.00" fill="#000000">calculate_TIN_scores</text>
<text text-anchor="middle" x="1773" y="-82" font-family="sans" font-size="10.00" fill="#000000">seqmode: single_end</text>
</g>
<!-- 8->0 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge8" class="edge">
<title>8->0</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1716.7318,-81.1874C1696.3622,-78.1141 1673.1665,-74.7493 1652,-72 1485.0195,-50.3108 1285.0455,-29.8148 1203.4405,-21.6829"/>
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<!-- 9->0 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge9" class="edge">
<title>9->0</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1227.3079,-71.8314C1217.3052,-63.0485 1205.145,-52.3712 1194.3001,-42.8489"/>
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<!-- 10->0 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge10" class="edge">
<title>10->0</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M815.8137,-73.5955C818.5749,-73.0445 821.311,-72.5106 824,-72 934.2562,-51.0658 1065.5934,-31.945 1128.6213,-23.1269"/>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="edge11" class="edge">
<title>11->0</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M975.0181,-71.9243C1023.708,-58.1766 1088.9805,-39.7467 1129.2269,-28.383"/>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="edge12" class="edge">
<title>12->0</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1104.6921,-71.8314C1114.6948,-63.0485 1126.855,-52.3712 1137.6999,-42.8489"/>
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BIOPZ-Iborra de Toledo Paula
committed
<g id="node14" class="node">
<title>13</title>
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<text text-anchor="middle" x="1101" y="-306" font-family="sans" font-size="10.00" fill="#000000">pe_remove_polya_cutadapt</text>
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge13" class="edge">
<title>13->3</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1061.2604,-290.4899C1041.9483,-280.6704 1019.0698,-267.3804 1001,-252 979.3295,-233.5548 959.5156,-207.8273 946.1836,-188.6015"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="949.0434,-186.5827 940.5308,-180.275 943.2519,-190.5145 949.0434,-186.5827"/>
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge17" class="edge">
<title>13->5</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1116.2047,-290.2419C1137.6908,-264.4409 1177.0406,-217.189 1201.5078,-187.8083"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1204.2772,-189.9521 1207.9869,-180.028 1198.8981,-185.4726 1204.2772,-189.9521"/>
BIOPZ-Iborra de Toledo Paula
committed
<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
<path fill="none" stroke="#d86e56" stroke-width="2" d="M1569.5,-252C1569.5,-252 1480.5,-252 1480.5,-252 1474.5,-252 1468.5,-246 1468.5,-240 1468.5,-240 1468.5,-228 1468.5,-228 1468.5,-222 1474.5,-216 1480.5,-216 1480.5,-216 1569.5,-216 1569.5,-216 1575.5,-216 1581.5,-222 1581.5,-228 1581.5,-228 1581.5,-240 1581.5,-240 1581.5,-246 1575.5,-252 1569.5,-252"/>
<text text-anchor="middle" x="1525" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">pe_map_genome_star</text>
BIOPZ-Iborra de Toledo Paula
committed
<!-- 13->23 -->
<g id="edge40" class="edge">
<title>13->23</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1169.2893,-291.1449C1174.2568,-290.0326 1179.1991,-288.9712 1184,-288 1278.5777,-268.8678 1389.0545,-252.4437 1458.033,-242.8876"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1458.8912,-246.3025 1468.3201,-241.4708 1457.9361,-239.368 1458.8912,-246.3025"/>
</g>
<!-- 14 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node15" class="node">
<title>14</title>
<path fill="none" stroke="#d8b456" stroke-width="2" d="M1107.5,-252C1107.5,-252 1022.5,-252 1022.5,-252 1016.5,-252 1010.5,-246 1010.5,-240 1010.5,-240 1010.5,-228 1010.5,-228 1010.5,-222 1016.5,-216 1022.5,-216 1022.5,-216 1107.5,-216 1107.5,-216 1113.5,-216 1119.5,-222 1119.5,-228 1119.5,-228 1119.5,-240 1119.5,-240 1119.5,-246 1113.5,-252 1107.5,-252"/>
<text text-anchor="middle" x="1065" y="-237" font-family="sans" font-size="10.00" fill="#000000">create_index_salmon</text>
<text text-anchor="middle" x="1065" y="-226" font-family="sans" font-size="10.00" fill="#000000">kmer: 31</text>
</g>
<!-- 14->3 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge14" class="edge">
<title>14->3</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1030.6815,-215.8314C1012.9641,-206.4516 991.1655,-194.9112 972.3016,-184.9244"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="973.7831,-181.7485 963.3076,-180.1628 970.5078,-187.935 973.7831,-181.7485"/>
</g>
<!-- 14->4 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge16" class="edge">
<title>14->4</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1065.2523,-215.8314C1065.3593,-208.131 1065.4865,-198.9743 1065.6053,-190.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1069.1049,-190.4609 1065.7443,-180.4133 1062.1056,-190.3637 1069.1049,-190.4609"/>
</g>
<!-- 15 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node16" class="node">
<title>15</title>
<path fill="none" stroke="#d88556" stroke-width="2" d="M1449,-326.5C1449,-326.5 1353,-326.5 1353,-326.5 1347,-326.5 1341,-320.5 1341,-314.5 1341,-314.5 1341,-302.5 1341,-302.5 1341,-296.5 1347,-290.5 1353,-290.5 1353,-290.5 1449,-290.5 1449,-290.5 1455,-290.5 1461,-296.5 1461,-302.5 1461,-302.5 1461,-314.5 1461,-314.5 1461,-320.5 1455,-326.5 1449,-326.5"/>
<text text-anchor="middle" x="1401" y="-306" font-family="sans" font-size="10.00" fill="#000000">remove_polya_cutadapt</text>
</g>
<!-- 15->4 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge15" class="edge">
<title>15->4</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1340.9243,-291.6426C1285.695,-276.0737 1211.4147,-254.9235 1205,-252 1165.8152,-234.1413 1124.8978,-206.3691 1097.6905,-186.3986"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1099.4735,-183.3631 1089.3583,-180.2112 1095.3002,-188.9831 1099.4735,-183.3631"/>
</g>
<!-- 15->6 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge19" class="edge">
<title>15->6</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1400.7507,-290.2419C1400.4075,-265.1025 1399.7863,-219.5981 1399.3837,-190.1029"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1402.8824,-189.9793 1399.2461,-180.028 1395.883,-190.0749 1402.8824,-189.9793"/>
BIOPZ-Iborra de Toledo Paula
committed
<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
<path fill="none" stroke="#78d856" stroke-width="2" d="M1684.5,-252C1684.5,-252 1611.5,-252 1611.5,-252 1605.5,-252 1599.5,-246 1599.5,-240 1599.5,-240 1599.5,-228 1599.5,-228 1599.5,-222 1605.5,-216 1611.5,-216 1611.5,-216 1684.5,-216 1684.5,-216 1690.5,-216 1696.5,-222 1696.5,-228 1696.5,-228 1696.5,-240 1696.5,-240 1696.5,-246 1690.5,-252 1684.5,-252"/>
<text text-anchor="middle" x="1648" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">map_genome_star</text>
BIOPZ-Iborra de Toledo Paula
committed
<!-- 15->24 -->
<g id="edge42" class="edge">
<title>15->24</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1461.4049,-290.8195C1496.4471,-280.4971 1541.6598,-267.068 1589.5811,-252.4162"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1590.6628,-255.7455 1599.1992,-249.4702 1588.6126,-249.0524 1590.6628,-255.7455"/>
</g>
<!-- 16 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node17" class="node">
<title>16</title>
<path fill="none" stroke="#a7d856" stroke-width="2" d="M1310,-252C1310,-252 1226,-252 1226,-252 1220,-252 1214,-246 1214,-240 1214,-240 1214,-228 1214,-228 1214,-222 1220,-216 1226,-216 1226,-216 1310,-216 1310,-216 1316,-216 1322,-222 1322,-228 1322,-228 1322,-240 1322,-240 1322,-246 1316,-252 1310,-252"/>
<text text-anchor="middle" x="1268" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">create_index_kallisto</text>
</g>
<!-- 16->5 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge18" class="edge">
<title>16->5</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1256.6446,-215.8314C1251.5674,-207.7079 1245.4773,-197.9637 1239.8824,-189.0118"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1242.7763,-187.0383 1234.5083,-180.4133 1236.8403,-190.7483 1242.7763,-187.0383"/>
</g>
<!-- 16->6 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge20" class="edge">
<title>16->6</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1301.0568,-215.8314C1317.9677,-206.5368 1338.7385,-195.1208 1356.7941,-185.1971"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1358.876,-188.0468 1365.9537,-180.1628 1355.5043,-181.9122 1358.876,-188.0468"/>
</g>
<!-- 17 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node18" class="node">
<title>17</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M1670,-180C1670,-180 1504,-180 1504,-180 1498,-180 1492,-174 1492,-168 1492,-168 1492,-156 1492,-156 1492,-150 1498,-144 1504,-144 1504,-144 1670,-144 1670,-144 1676,-144 1682,-150 1682,-156 1682,-156 1682,-168 1682,-168 1682,-174 1676,-180 1670,-180"/>
<text text-anchor="middle" x="1587" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">pe_index_genomic_alignment_samtools</text>
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge21" class="edge">
<title>17->7</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1587,-143.8314C1587,-136.131 1587,-126.9743 1587,-118.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1590.5001,-118.4132 1587,-108.4133 1583.5001,-118.4133 1590.5001,-118.4132"/>
</g>
<!-- 18 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node19" class="node">
<title>18</title>
<path fill="none" stroke="#56d8a2" stroke-width="2" d="M1833.5,-180C1833.5,-180 1712.5,-180 1712.5,-180 1706.5,-180 1700.5,-174 1700.5,-168 1700.5,-168 1700.5,-156 1700.5,-156 1700.5,-150 1706.5,-144 1712.5,-144 1712.5,-144 1833.5,-144 1833.5,-144 1839.5,-144 1845.5,-150 1845.5,-156 1845.5,-156 1845.5,-168 1845.5,-168 1845.5,-174 1839.5,-180 1833.5,-180"/>
<text text-anchor="middle" x="1773" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">extract_transcripts_as_bed12</text>
</g>
<!-- 18->7 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge22" class="edge">
<title>18->7</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1726.0643,-143.8314C1700.8563,-134.0734 1669.6074,-121.977 1643.1209,-111.7242"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1644.1873,-108.384 1633.5981,-108.038 1641.6603,-114.912 1644.1873,-108.384"/>
</g>
<!-- 18->8 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge24" class="edge">
<title>18->8</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1773,-143.8314C1773,-136.131 1773,-126.9743 1773,-118.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1776.5001,-118.4132 1773,-108.4133 1769.5001,-118.4133 1776.5001,-118.4132"/>
</g>
<!-- 19 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="node20" class="node">
<title>19</title>
<path fill="none" stroke="#d89c56" stroke-width="2" d="M2026,-180C2026,-180 1876,-180 1876,-180 1870,-180 1864,-174 1864,-168 1864,-168 1864,-156 1864,-156 1864,-150 1870,-144 1876,-144 1876,-144 2026,-144 2026,-144 2032,-144 2038,-150 2038,-156 2038,-156 2038,-168 2038,-168 2038,-174 2032,-180 2026,-180"/>
<text text-anchor="middle" x="1951" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">index_genomic_alignment_samtools</text>
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge23" class="edge">
<title>19->8</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1906.0831,-143.8314C1882.065,-134.1162 1852.3166,-122.0831 1827.0408,-111.8592"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1828.1767,-108.5432 1817.5939,-108.038 1825.5518,-115.0325 1828.1767,-108.5432"/>
BIOPZ-Iborra de Toledo Paula
committed
<g id="node21" class="node">
<title>20</title>
<path fill="none" stroke="#569ad8" stroke-width="2" d="M1222,-401C1222,-401 954,-401 954,-401 948,-401 942,-395 942,-389 942,-389 942,-377 942,-377 942,-371 948,-365 954,-365 954,-365 1222,-365 1222,-365 1228,-365 1234,-371 1234,-377 1234,-377 1234,-389 1234,-389 1234,-395 1228,-401 1222,-401"/>
<text text-anchor="middle" x="1088" y="-386" font-family="sans" font-size="10.00" fill="#000000">pe_remove_adapters_cutadapt</text>
<text text-anchor="middle" x="1088" y="-375" font-family="sans" font-size="10.00" fill="#000000">sample: synthetic_10_reads_paired_synthetic_10_reads_paired</text>
</g>
<!-- 20->13 -->
BIOPZ-Iborra de Toledo Paula
committed
<g id="edge33" class="edge">
<title>20->13</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1091.1469,-364.9656C1092.6369,-356.427 1094.4506,-346.0333 1096.1138,-336.502"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1099.5658,-337.0793 1097.837,-326.6265 1092.67,-335.876 1099.5658,-337.0793"/>
BIOPZ-Iborra de Toledo Paula
committed
<g id="node22" class="node">
<title>21</title>
<path fill="none" stroke="#566bd8" stroke-width="2" d="M1306.5,-326.5C1306.5,-326.5 1205.5,-326.5 1205.5,-326.5 1199.5,-326.5 1193.5,-320.5 1193.5,-314.5 1193.5,-314.5 1193.5,-302.5 1193.5,-302.5 1193.5,-296.5 1199.5,-290.5 1205.5,-290.5 1205.5,-290.5 1306.5,-290.5 1306.5,-290.5 1312.5,-290.5 1318.5,-296.5 1318.5,-302.5 1318.5,-302.5 1318.5,-314.5 1318.5,-314.5 1318.5,-320.5 1312.5,-326.5 1306.5,-326.5"/>
<text text-anchor="middle" x="1256" y="-311.5" font-family="sans" font-size="10.00" fill="#000000">extract_transcriptome</text>
<text text-anchor="middle" x="1256" y="-300.5" font-family="sans" font-size="10.00" fill="#000000">organism: homo_sapiens</text>
</g>
<!-- 21->14 -->
<g id="edge34" class="edge">
<title>21->14</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1209.7642,-290.4656C1182.9826,-280.0194 1149.0828,-266.7967 1120.8216,-255.7734"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1122.0603,-252.4997 1111.472,-252.1265 1119.5165,-259.0212 1122.0603,-252.4997"/>
</g>
<!-- 21->16 -->
<g id="edge36" class="edge">
<title>21->16</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1258.9049,-290.4656C1260.2802,-281.927 1261.9544,-271.5333 1263.4896,-262.002"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1266.9454,-262.5559 1265.0803,-252.1265 1260.0345,-261.4426 1266.9454,-262.5559"/>
BIOPZ-Iborra de Toledo Paula
committed
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
<!-- 22 -->
<g id="node23" class="node">
<title>22</title>
<path fill="none" stroke="#56d87b" stroke-width="2" d="M1544,-401C1544,-401 1264,-401 1264,-401 1258,-401 1252,-395 1252,-389 1252,-389 1252,-377 1252,-377 1252,-371 1258,-365 1264,-365 1264,-365 1544,-365 1544,-365 1550,-365 1556,-371 1556,-377 1556,-377 1556,-389 1556,-389 1556,-395 1550,-401 1544,-401"/>
<text text-anchor="middle" x="1404" y="-386" font-family="sans" font-size="10.00" fill="#000000">remove_adapters_cutadapt</text>
<text text-anchor="middle" x="1404" y="-375" font-family="sans" font-size="10.00" fill="#000000">sample: synthetic_10_reads_mate_1_synthetic_10_reads_mate_1</text>
</g>
<!-- 22->15 -->
<g id="edge35" class="edge">
<title>22->15</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1403.2738,-364.9656C1402.9336,-356.5178 1402.5203,-346.2542 1402.1399,-336.8064"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1405.6295,-336.4776 1401.7299,-326.6265 1398.6352,-336.7593 1405.6295,-336.4776"/>
</g>
<!-- 23->17 -->
<g id="edge37" class="edge">
<title>23->17</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1540.6452,-215.8314C1547.8591,-207.454 1556.557,-197.3531 1564.4605,-188.1749"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1567.2711,-190.2748 1571.1441,-180.4133 1561.9667,-185.7071 1567.2711,-190.2748"/>
</g>
<!-- 24->19 -->
<g id="edge38" class="edge">
<title>24->19</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1696.6822,-222.432C1742.0379,-211.6543 1810.6724,-195.3452 1865.2132,-182.385"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1866.3044,-185.7232 1875.2243,-180.0061 1864.6861,-178.9129 1866.3044,-185.7232"/>
</g>
<!-- 25 -->
<g id="node26" class="node">
<title>25</title>
<path fill="none" stroke="#8fd856" stroke-width="2" d="M1615.5,-329C1615.5,-329 1514.5,-329 1514.5,-329 1508.5,-329 1502.5,-323 1502.5,-317 1502.5,-317 1502.5,-300 1502.5,-300 1502.5,-294 1508.5,-288 1514.5,-288 1514.5,-288 1615.5,-288 1615.5,-288 1621.5,-288 1627.5,-294 1627.5,-300 1627.5,-300 1627.5,-317 1627.5,-317 1627.5,-323 1621.5,-329 1615.5,-329"/>
<text text-anchor="middle" x="1565" y="-317" font-family="sans" font-size="10.00" fill="#000000">create_index_star</text>
<text text-anchor="middle" x="1565" y="-306" font-family="sans" font-size="10.00" fill="#000000">index_size: 75</text>
<text text-anchor="middle" x="1565" y="-295" font-family="sans" font-size="10.00" fill="#000000">organism: homo_sapiens</text>
</g>
<!-- 25->23 -->
<g id="edge39" class="edge">
<title>25->23</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1553.8578,-287.7476C1549.397,-279.4394 1544.1995,-269.7591 1539.4543,-260.9211"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1542.5369,-259.2634 1534.7228,-252.1087 1536.3696,-262.5747 1542.5369,-259.2634"/>
</g>
<!-- 25->24 -->
<g id="edge41" class="edge">
<title>25->24</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1588.1201,-287.7476C1598.0583,-278.8272 1609.7587,-268.3251 1620.1677,-258.982"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1622.7213,-261.3931 1627.8252,-252.1087 1618.0455,-256.1838 1622.7213,-261.3931"/>