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05e5a95a

Commit 05e5a95a authored 5 years ago by Alex Kanitz

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Merge branch 'polya_trimming_correction' into 'master'

Polya trimming correction

Closes #98

See merge request zavolan_group/pipelines/rhea!50

parents 27f4fa5b 392b04d2

Branches

Tags 1.0 autotransfer-v1

1 merge request!50Polya trimming correction

Pipeline #10513 passed 5 years ago

Stage: test

Changes 10
Pipelines 1

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pipeline_documentation.md 12 additions, 21 deletions

pipeline_documentation.md
scripts/labkey_to_snakemake.py 15 additions, 8 deletions

scripts/labkey_to_snakemake.py
tests/input_files/samples.tsv 3 additions, 3 deletions

tests/input_files/samples.tsv
tests/test_integration_workflow/expected_output.md5 10 additions, 10 deletions

tests/test_integration_workflow/expected_output.md5
tests/test_integration_workflow/test.local.sh 1 addition, 1 deletion

tests/test_integration_workflow/test.local.sh
tests/test_scripts_labkey_to_snakemake_api/expected_output.md5 1 addition, 1 deletion

.../test_scripts_labkey_to_snakemake_api/expected_output.md5
tests/test_scripts_labkey_to_snakemake_table/expected_output.md5 1 addition, 1 deletion

...est_scripts_labkey_to_snakemake_table/expected_output.md5
tests/test_scripts_labkey_to_snakemake_table/test.sh 1 addition, 0 deletions

tests/test_scripts_labkey_to_snakemake_table/test.sh
workflow/rules/paired_end.snakefile.smk 8 additions, 2 deletions

workflow/rules/paired_end.snakefile.smk
workflow/rules/single_end.snakefile.smk 4 additions, 1 deletion

workflow/rules/single_end.snakefile.smk

with 56 additions and 48 deletions

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