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Commit 7c74291b authored by BIOPZ-Gypas Foivos's avatar BIOPZ-Gypas Foivos
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Set STAR multimapper parameter `--outFilterMultimapScoreRange` to `0`

parents 443c7950 3a9ec893
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2 merge requests!76Bump version to v0.2.0,!66Set STAR multimapper parameter
Pipeline #10993 passed
Stage: test
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workflow/rules/paired_end.snakefile.smk
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......@@ -228,7 +228,7 @@ rule pe_map_genome_star:
--readFilesCommand zcat \
--outSAMunmapped None \
--outFilterMultimapNmax {params.multimappers} \
--outFilterMultimapScoreRange 1 \
--outFilterMultimapScoreRange 0 \
--outFileNamePrefix {params.outFileNamePrefix} \
--outSAMattributes All \
--outStd BAM_SortedByCoordinate \
......
workflow/rules/single_end.snakefile.smk
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− 1
View file @ 7c74291b
......@@ -182,7 +182,7 @@ rule map_genome_star:
--readFilesCommand zcat \
--outSAMunmapped None \
--outFilterMultimapNmax {params.multimappers} \
--outFilterMultimapScoreRange 1 \
--outFilterMultimapScoreRange 0 \
--outFileNamePrefix {params.outFileNamePrefix} \
--outSAMattributes All \
--outStd BAM_SortedByCoordinate \
......
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