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Merge branch 'test_files' into 'master'
Replace test files with small synthetic ones See merge request zavolan_group/pipelines/rnaseqpipeline!16
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- .gitignore 1 addition, 0 deletions.gitignore
- .gitlab-ci.yml 2 additions, 0 deletions.gitlab-ci.yml
- images/workflow_dag.svg 181 additions, 139 deletionsimages/workflow_dag.svg
- tests/test_create_dag_chart/input_files/GSM1502498_1.fastq.gz 0 additions, 0 deletions...s/test_create_dag_chart/input_files/GSM1502498_1.fastq.gz
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- tests/test_create_dag_chart/input_files/GSM1502500_2.fastq.gz 0 additions, 0 deletions...s/test_create_dag_chart/input_files/GSM1502500_2.fastq.gz
- tests/test_create_dag_chart/input_files/chr1-10000-20000.fa 168 additions, 0 deletionstests/test_create_dag_chart/input_files/chr1-10000-20000.fa
- tests/test_create_dag_chart/input_files/chr1-10000-20000.gtf 28 additions, 0 deletionstests/test_create_dag_chart/input_files/chr1-10000-20000.gtf
- tests/test_create_dag_chart/input_files/chr1-10000-20000.transcripts.fa 54 additions, 0 deletions...ate_dag_chart/input_files/chr1-10000-20000.transcripts.fa
- tests/test_create_dag_chart/input_files/synthetic.mate_1.fastq.gz 0 additions, 0 deletions...st_create_dag_chart/input_files/synthetic.mate_1.fastq.gz
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- tests/test_create_dag_chart/samples.tsv 2 additions, 2 deletionstests/test_create_dag_chart/samples.tsv
- tests/test_integration_workflow/expected_output.files 132 additions, 0 deletionstests/test_integration_workflow/expected_output.files
- tests/test_integration_workflow/expected_output.md5 132 additions, 12 deletionstests/test_integration_workflow/expected_output.md5
- tests/test_integration_workflow/input_files/GSM1502498_1.fastq.gz 0 additions, 0 deletions...st_integration_workflow/input_files/GSM1502498_1.fastq.gz
- tests/test_integration_workflow/input_files/GSM1502498_2.fastq.gz 0 additions, 0 deletions...st_integration_workflow/input_files/GSM1502498_2.fastq.gz
- tests/test_integration_workflow/input_files/GSM1502500_1.fastq.gz 0 additions, 0 deletions...st_integration_workflow/input_files/GSM1502500_1.fastq.gz
- tests/test_integration_workflow/input_files/GSM1502500_2.fastq.gz 0 additions, 0 deletions...st_integration_workflow/input_files/GSM1502500_2.fastq.gz
- tests/test_integration_workflow/input_files/Homo_sapiens.GRCh38.99.chr.chrom_22.gtf 0 additions, 62504 deletions...kflow/input_files/Homo_sapiens.GRCh38.99.chr.chrom_22.gtf
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