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f5e2f6ac

Commit f5e2f6ac authored 4 years ago by Dominik Burri Committed by Alex Kanitz 4 years ago

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extend ALFA functionality

- generate nucleotide distribution for unique reads only
- new rule to generate PNG image for MultiQC

parent 05e5a95a

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Changes 7

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Snakefile 56 additions, 22 deletions

Snakefile
images/dag_test_workflow.svg 625 additions, 433 deletions

images/dag_test_workflow.svg
images/rule_graph.svg 400 additions, 313 deletions

images/rule_graph.svg
tests/test_alfa/expected_output.md5 24 additions, 12 deletions

tests/test_alfa/expected_output.md5
tests/test_alfa/test.sh 1 addition, 1 deletion

tests/test_alfa/test.sh
tests/test_integration_workflow/expected_output.md5 12 additions, 6 deletions

tests/test_integration_workflow/expected_output.md5
tests/test_integration_workflow/test.local.sh 1 addition, 1 deletion

tests/test_integration_workflow/test.local.sh

with 1119 additions and 788 deletions

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