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Commit 1138b3a5 authored by Kai Schleicher's avatar Kai Schleicher
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fix: fixed typo in folder naming

parent 10985720
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...@@ -373,7 +373,7 @@ raw_image_title = fix_BF_czi_imagetitle(raw) ...@@ -373,7 +373,7 @@ raw_image_title = fix_BF_czi_imagetitle(raw)
# take care of paths and directories # take care of paths and directories
input_rois_path = fix_ij_dirs( roi_zip ) input_rois_path = fix_ij_dirs( roi_zip )
output_dir = fix_ij_dirs(output_dir) + "/2a_central_nuclei_counter/" output_dir = fix_ij_dirs(output_dir) + "/2b_central_nuclei_counter/"
if not os.path.exists( output_dir ): if not os.path.exists( output_dir ):
os.makedirs( output_dir ) os.makedirs( output_dir )
......
...@@ -378,7 +378,7 @@ raw_image_title = fix_BF_czi_imagetitle(raw) ...@@ -378,7 +378,7 @@ raw_image_title = fix_BF_czi_imagetitle(raw)
# output_dir = fix_ij_dirs(output_dir) # output_dir = fix_ij_dirs(output_dir)
input_rois_path = fix_ij_dirs( roi_zip ) input_rois_path = fix_ij_dirs( roi_zip )
output_dir = fix_ij_dirs(output_dir) + "/2b_fibertyping/" output_dir = fix_ij_dirs(output_dir) + "/2c_fibertyping/"
if not os.path.exists( output_dir ): if not os.path.exists( output_dir ):
os.makedirs( output_dir ) os.makedirs( output_dir )
......
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