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imcf
myosoft-imcf
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a01d4d7b
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a01d4d7b
authored
2 weeks ago
by
Kai Schleicher
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Add spots_in_fibers description to README
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@@ -40,6 +40,11 @@ Original code: <https://github.com/Hyojung-Choo/Myosoft/tree/Myosoft-hub>
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Includes identification of double and triple positive combinations.
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The ROI color code is annotated in the results table.
## [`2d_spots_in_fibers.py`](2d_spots_in_fibers.py)
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Identifies spots in fibers in all desired channels Fiber ROI-zip
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Includes classification into of DAPI positive or DAPI negative spots
## [`3_manual_rerun.py`](3_manual_rerun.py)
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Requires an already open image with an already populated ROI manager.
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