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Commit d6ed724d authored by Kai Schleicher's avatar Kai Schleicher
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Adapt to api change in trackmate

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2d_spots_in_fibers.py
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...@@ -313,7 +313,8 @@ def run_trackmate_dog_spot_detector(imp, quality_threshold): ...@@ -313,7 +313,8 @@ def run_trackmate_dog_spot_detector(imp, quality_threshold):
exportSpotsAsDots = True exportSpotsAsDots = True
exportTracksOnly = False exportTracksOnly = False
label_imp = LabelImgExporter.createLabelImagePlus(trackmate, exportSpotsAsDots, exportTracksOnly, False) labelIdPainting = LabelImgExporter.LabelIdPainting.LABEL_IS_SPOT_ID
label_imp = LabelImgExporter.createLabelImagePlus(trackmate, exportSpotsAsDots, exportTracksOnly, labelIdPainting)
label_imp.setCalibration(cal) label_imp.setCalibration(cal)
imp.close() imp.close()
......
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