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Commit 2e7af51e authored by Joana Pereira's avatar Joana Pereira
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implemented the detection of OMBBs that form complexes with OMBBs

parent 06133577
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......@@ -719,7 +719,7 @@ def get_secondary_structure(pdb_file):
run_dssp = sp.Popen(['mkdssp', '-i', pdb_file, '-o', out_file], stdout=sp.PIPE, stderr=sp.PIPE, stdin=sp.PIPE)
stdout, stderr = run_dssp.communicate()
print(stdout)
print(stderr)
if len(stderr) > 0:
run_dssp = sp.Popen(['dssp', '-i', pdb_file, '-o', out_file], stdout=sp.PIPE, stderr=sp.PIPE, stdin=sp.PIPE)
stdout, stderr = run_dssp.communicate()
......
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