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schwede
openstructure
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802969a3
Commit
802969a3
authored
5 years ago
by
Studer Gabriel
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update version numbers in install doc
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modules/doc/install.rst
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802969a3
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@@ -7,7 +7,7 @@ Brief Overview
For a simple and portable way to use OpenStructure we recommend using a
container solution. We provide recipes to build images for
`Docker <https://www.docker.com/>`_ and
`Singularity <https://
www.
sylabs.io/
guides/2.5.1/user-guide
>`_.
`Singularity <https://sylabs.io/
singularity/
>`_.
The latest recipes and instructions can be found on our GitLab site
(`Docker instructions`_ and `Singularity instructions`_).
...
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@@ -23,13 +23,14 @@ the steps which we describe in detail below. In essence, these steps are:
Installing the Dependencies
--------------------------------------------------------------------------------
OpenStructure uses a bunch of open-source libraries. If you haven't already
installed them, please install them now! Where appropriate, the minimally
required version is given in parentheses.
OpenStructure requires a c++11 enabled compiler (e.g. recent gcc/clang) and uses
a bunch of open-source libraries. If you haven't already installed them, please
install them now! Where appropriate, the minimally required version is given in
parentheses.
* `CMake <http://cmake.org>`_ (2.6.4)
* `Python
2
<http://python.org>`_ (
2.7
)
* `Boost <http://boost.org>`_ (1.5
3
)
* `Python
3
<http://python.org>`_ (
3.6
)
* `Boost <http://boost.org>`_ (1.
6
5)
* `zlib <https://zlib.net/>`_ (usually comes with Boost or system)
* `Eigen3 <http://eigen.tuxfamily.org>`_ (3.2.0)
* `SQLite3 <https://www3.sqlite.org>`_ (3.7.13)
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@@ -45,7 +46,7 @@ When you enable support for image processing, you will need:
If you would like to use the info module, also install:
* `Qt5 <http://qt-project.org/>`_
and a C++11 compatible compiler
* `Qt5 <http://qt-project.org/>`_
If you would like to use the graphical user interface (GUI), also install:
...
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@@ -69,7 +70,7 @@ get the source code, use git clone:
git clone https://git.scicore.unibas.ch/schwede/openstructure.git <directory-name>
The above command will clone OpenStructure into the directory specified by
`<directory-name>`. If omitted, the directory will be called o
st
.
`<directory-name>`. If omitted, the directory will be called o
penstructure
.
.. note::
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@@ -298,7 +299,7 @@ All the dependencies can be installed from the package manager as follows:
.. code-block:: bash
sudo apt-get install cmake g++ sip-dev libtiff-dev libfftw3-dev libeigen3-dev \
libpng-dev python-all python
2.7 python
-pyqt5 libboost-all-dev \
libpng-dev python
3
-all python
3
-pyqt5 libboost-all-dev \
qt5-qmake qtbase5-dev libpng-dev libsqlite3-dev
Now, all dependencies are located in standard locations and cmake will
...
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@@ -309,7 +310,7 @@ version of OpenStructure.
.. code-block:: bash
cmake . -DPYTHON_LIBRARIES=/usr/lib/x86_64-linux-gnu/libpython
2.7
.so \
cmake . -DPYTHON_LIBRARIES=/usr/lib/x86_64-linux-gnu/libpython
3.6m
.so \
-DOPTIMIZE=ON
...
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