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make blosum data reproducible
Reason for that effort was the detection of an error in one of the entries in BLOSUM100 (a missing minus, see diff). To guarantee reproducibility (and check all matrices for errors), the blosum matrix files from NCBI at ftp://ftp.ncbi.nlm.nih.gov/blast/matrices/ have been downloaded and the generate_blosum_data.py script spits out the required content in subst_weight_matrix.cc.
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- modules/seq/alg/src/data/BLOSUM100 31 additions, 0 deletionsmodules/seq/alg/src/data/BLOSUM100
- modules/seq/alg/src/data/BLOSUM45 31 additions, 0 deletionsmodules/seq/alg/src/data/BLOSUM45
- modules/seq/alg/src/data/BLOSUM62 31 additions, 0 deletionsmodules/seq/alg/src/data/BLOSUM62
- modules/seq/alg/src/data/BLOSUM80 31 additions, 0 deletionsmodules/seq/alg/src/data/BLOSUM80
- modules/seq/alg/src/data/generate_blosum_data.py 47 additions, 0 deletionsmodules/seq/alg/src/data/generate_blosum_data.py
- modules/seq/alg/src/subst_weight_matrix.cc 5 additions, 2 deletionsmodules/seq/alg/src/subst_weight_matrix.cc
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