Commit b9d8e1c6 authored by Studer Gabriel's avatar Studer Gabriel
Browse files

documentation for ProModII evaluation

parent 79839399
......@@ -39,6 +39,17 @@ Modelling with ProMod3 and MODELLER
modeller_models directory:
`python build_modeller_models.py`
Modelling with ProModII
-----------------------
- ProModII is considered legacy software and only available on our internal
systems. We provide the resulting models in this repository for further
processing. Only 169 modelling runs successfully produced a result.
After setting up the environment (loading ProModII/3.70 and
ProMod3/3.1.1-foss-2018b-Python-3.6.6-OST-2.1.0 modules), the models have
been built by calling:
`pm build_promodII_models.py`
Evaluation
----------
......@@ -60,4 +71,6 @@ Evaluation
`python score_models.py`
- Plots and some key values based on the score json files are generated with:
`python do_plots.py`
- For the additional evaluation with ProModII execute:
`python do_plots_promodII`
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