CI

.gitlab-ci.yml

 
 stages:
-  - qc
   - test
 
-qc_1:
-  image: python:3.9-slim-buster
-  stage: qc
-
-  before_script:
-    - pip install -r requirements.txt
-    - pip install -r requirements_dev.txt
-    - pip install -e .
-
-  script:
-    - flake8 src/ setup.py
-    - coverage run --source src/ -m pytest
-    - coverage report --fail-under=100
-    - mypy src/
-
-test_1:
-  image: python:3.9-slim-buster
-  stage: test
-
-  before_script:
-    - pip install -r requirements.txt
-    - pip install -r requirements_dev.txt
-    - pip install -e .
-
-  script:
-    - python -m pytest
-
-test_2:
+test_nextflow:
   image: nextflow/nextflow:21.10.6
   stage: test
   script: