Commits · Issue#3 · zavolan_group / pipelines / scRNA-seq-simulation · GitLab

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Apr 01, 2022
- Update src/generate_transcripts.nf · ec88613f
  Boris Jurič authored 3 years ago
  
  ec88613f
- Update src/poly_a.py · 2cee53f8
  Boris Jurič authored 3 years ago
  
  2cee53f8
- Update src/poly_a.py · 0ecfcb13
  Boris Jurič authored 3 years ago
  
  0ecfcb13
- Update .gitlab-ci.yml file · c54e2cc7
  Boris Jurič authored 3 years ago
  
  c54e2cc7
- Update .gitlab-ci.yml · 4e6f9030
  Boris Jurič authored 3 years ago
  
  4e6f9030
- Update requirements_dev.txt · b85775b3
  Boris Jurič authored 3 years ago
  
  b85775b3
- Update src/poly_a.py · 5f3e8030
  Boris Jurič authored 3 years ago
  
  5f3e8030
- Update requirements_dev.txt · 8a777b88
  Boris Jurič authored 3 years ago
  
  8a777b88
- Make src/poly_a.py runnable, added fasta processing. Initial transcript generation workflow. · 061f425f
  Boris Jurič authored 3 years ago
  
  061f425f
Dec 07, 2021
- feat: add parameter class · 557be05b
  Michele Garioni authored 3 years ago and Alex Kanitz committed 3 years ago
  
  557be05b
Nov 24, 2021
- test: add mock data for ML task · 95d07fbd
  MihaelaZavolan authored 3 years ago and Alex Kanitz committed 3 years ago
  
  95d07fbd
Nov 17, 2021
- feat: function to generate poly(A) tail sequence · 444cc961
  MihaelaZavolan authored 3 years ago and Alex Kanitz committed 3 years ago
  
  444cc961
- feat: add sampling from transcript file · e8f8acc9
  Michele Garioni authored 3 years ago
  
  e8f8acc9
Nov 10, 2021
- Added transcript expression and annotation files · fd2973bc
  MihaelaZavolan authored 3 years ago and Alex Kanitz committed 3 years ago
  
  fd2973bc
- Merge branch 'feature' into 'main' · a9c9bba1
  Michele Garioni authored 3 years ago
  
  doc: add .gitignore See merge request !1
  a9c9bba1
- Merge branch 'add-license' into 'main' · c54a0a48
  Gregory Zaugg authored 3 years ago
  
  chore: added MIT license See merge request !4
  c54a0a48
- chore: added MIT license · eab7a857
  TheRiPtide authored 3 years ago
  
  eab7a857
- Merge branch 'ci' into 'main' · 29c80236
  Gregory Zaugg authored 3 years ago
  
  ci: implement ci pipeline See merge request !2
  29c80236
- ci: implement ci pipeline · d2315040
  Gregory Zaugg authored 3 years ago
  
  d2315040
Nov 08, 2021
- doc: add .gitignore · 775cde0f
  Michele Garioni authored 3 years ago
  
  775cde0f
Nov 02, 2021
- Update README.md · 3d645190
  MihaelaZavolan authored 3 years ago
  
  3d645190
- Update README.md · c1ffa8a1
  MihaelaZavolan authored 3 years ago
  
  c1ffa8a1
- Update README.md · d6c0c23b
  MihaelaZavolan authored 3 years ago
  
  d6c0c23b
- Update README.md · 188b8d62
  MihaelaZavolan authored 3 years ago
  
  188b8d62
- Initial commit · 4a44ed92
  MihaelaZavolan authored 3 years ago
  
  4a44ed92