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d60fefdc

Commit d60fefdc authored 5 years ago by Alex Kanitz

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Merge branch 'subpipelines' into 'master'

Wire all available rules

See merge request zavolan_group/pipelines/rnaseqpipeline!15

parents d5c96d88 ca9a2bb4

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1 merge request!15Wire all available rules

Pipeline #10184 passed 5 years ago

Stage: test

Changes 9
Pipelines 1

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.gitignore 3 additions, 1 deletion

.gitignore
images/workflow_dag.svg 202 additions, 65 deletions

images/workflow_dag.svg
snakemake/Snakefile 33 additions, 25 deletions

snakemake/Snakefile
snakemake/paired_end.snakefile.smk 15 additions, 14 deletions

snakemake/paired_end.snakefile.smk
snakemake/preprocessing.snakefile.smk 0 additions, 28 deletions

snakemake/preprocessing.snakefile.smk
snakemake/single_end.snakefile.smk 30 additions, 28 deletions

snakemake/single_end.snakefile.smk
tests/test_create_dag_chart/samples.tsv 2 additions, 2 deletions

tests/test_create_dag_chart/samples.tsv
tests/test_integration_workflow/expected_output.md5 8 additions, 4 deletions

tests/test_integration_workflow/expected_output.md5
tests/test_integration_workflow/samples.tsv 2 additions, 2 deletions

tests/test_integration_workflow/samples.tsv

with 295 additions and 169 deletions

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