Commits · 79c3d9fded725446294754f15f45dcae67f6a05c · zavolan_group / pipelines / ZARP

Oct 23, 2020
- add --no-hooks for CI tests, mark output files of salmon for multiqc, adjust files for md5 check. · e791ce60
  Dominik Burri authored 4 years ago
  
  e791ce60
Oct 19, 2020
- use --notemp for CI tests · 5aa65223
  Dominik Burri authored 4 years ago
  
  5aa65223
Jun 23, 2020
- Merge kallisto rules: kallisto_merge_genes and kallisto_merge_transcript · 1f007e19
  BIOPZ-Iborra de Toledo Paula authored 4 years ago and BIOPZ-Gypas Foivos committed 4 years ago
  
  The rules rely on https://github.com/zavolanlab/merge_kallisto Update info in pipeline_documentation.md
  1f007e19
Jun 15, 2020

fix: Renamed samples_concat.tsv to samples.multiple_lanes.tsv. Renamed rows... · 05c167fd

BIOPZ-Katsantoni Maria authored 4 years ago and

Alex Kanitz committed 4 years ago

fix: Renamed samples_concat.tsv to samples.multiple_lanes.tsv. Renamed rows with split with the same name as the other test samples, so that I do not change the tests (md5 and sunch). Removed the one lane samples. Created config that uses this tsv file

05c167fd