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Commit a7d899e9 authored by BIOPZ-Iborra de Toledo Paula's avatar BIOPZ-Iborra de Toledo Paula
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Update README.md

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......@@ -66,7 +66,7 @@ Execute the following command to run the test workflow on a Slurm-managed high-p
Assuming that you are currently inside the repository's root directory...
* To run the pipeline with your own samples:
* To run the pipeline with your own input files:
```bash
cd RUN_JOB
```
......@@ -83,6 +83,8 @@ To start pipeline execution in Slurm:
```
After succesfully execution of the workflow results and logs outputs will be found in `results/` and `logs/` directories.
In `RUN_JOB1` folder you will find an exemple to run the pipeline with Human as organism.
> **NOTE:** Depending on the configuration of your Slurm installation or if using a different workflow manager,
> you may need to adapt file `cluster.json` (located in root directory) and the arguments to options `--config` and `--cores` in file
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