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Commit ce67ac87 authored by Kathleen Moriarty's avatar Kathleen Moriarty
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fix mypy problems

parent 0b2cb762
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1 merge request!17Issue 7
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"""Command Line Interface."""
import argparse
from read_sequencing import read_sequencing
from src.read_sequencing import read_sequencing
def parse_args() -> argparse.Namespace:
......@@ -39,7 +39,7 @@ def main() -> None:
Runs the functions read_sequencing.
"""
args = parse_args()
read_sequencing(frag_file_name=args.frag_file_name,
read_sequencing.read_sequencing(frag_file_name=args.frag_file_name,
output_file_name=args.output_file_name,
num_reads=args.num_reads,
read_len=args.read_len)
......
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