Commits · Issue_4 · zavolan_group / pipelines / scRNA-seq-simulation · GitLab

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Jan 05, 2022
- additional check in pytest · d5ac4ae7
  Melvin Alappat authored 3 years ago
  
  d5ac4ae7
Jan 03, 2022
- fix: remove unnecessary class · 0329e263
  Melvin Alappat authored 3 years ago
  
  0329e263
- fix: remove unnecessary class · 4456ea0f
  Melvin Alappat authored 3 years ago
  
  4456ea0f
- adjusted test file · ec7f686c
  Melvin Alappat authored 3 years ago
  
  ec7f686c
Jan 02, 2022
- feat:logging added · abb1e512
  Melvin Alappat authored 3 years ago
  
  abb1e512
Dec 30, 2021
- updated workflow · 4c591824
  Melvin Alappat authored 3 years ago
  
  4c591824
- feat: execution of python script in workflow · 81e851d5
  Melvin Alappat authored 3 years ago
  
  81e851d5
- add: bin folder for nextflow · 6171438b
  Melvin Alappat authored 3 years ago
  
  6171438b
- add nextflow.config · d149f7d9
  Melvin Alappat authored 3 years ago
  
  d149f7d9
- changing directory · 18926491
  Melvin Alappat authored 3 years ago
  
  18926491
- add: Nextflow process · 2e371c17
  Melvin Alappat authored 3 years ago
  
  2e371c17
- deleting old nextflow process · 0c46921b
  Melvin Alappat authored 3 years ago
  
  0c46921b
- add: potential input files · e3650eab
  Melvin Alappat authored 3 years ago
  
  e3650eab
- add: __init__.py file · ab36e23a
  Melvin Alappat authored 3 years ago
  
  ab36e23a
Dec 22, 2021
- add: adding ignore comment · 6907a807
  Melvin Alappat authored 3 years ago
  
  6907a807
- feat: ignoring mypy · b4cd2abb
  Melvin Alappat authored 3 years ago
  
  b4cd2abb
- deleting old file · abf6458e
  Melvin Alappat authored 3 years ago
  
  abf6458e
- change: adding scipy · 7ae6757a
  Melvin Alappat authored 3 years ago
  
  7ae6757a
Dec 20, 2021
- feat: Adding updated priming_prob.py and CLI · 131062fe
  Melvin Alappat authored 3 years ago
  
  131062fe
- added: tests for priming_prob.py and CLI · 8c2b856e
  Melvin Alappat authored 3 years ago
  
  8c2b856e
- Adding test-input files · 56a52990
  Melvin Alappat authored 3 years ago
  
  56a52990
Dec 08, 2021
- feat: adding code for Issue_4 · 75735c39
  Melvin Alappat authored 3 years ago
  
  75735c39
Dec 07, 2021
- Adding linted version of Issue #4 code · c154c55a
  Melvin Alappat authored 3 years ago
  
  c154c55a
- feat: add parameter class · 557be05b
  Michele Garioni authored 3 years ago and Alex Kanitz committed 3 years ago
  
  557be05b
Dec 01, 2021
- feat: nextflow workflow for issue 4 · 9ca598fb
  Melvin Alappat authored 3 years ago
  
  9ca598fb
- feat: adding code for Issue_4 · 83aefb98
  Melvin Alappat authored 3 years ago
  
  83aefb98
Nov 24, 2021
- test: add mock data for ML task · 95d07fbd
  MihaelaZavolan authored 3 years ago and Alex Kanitz committed 3 years ago
  
  95d07fbd
Nov 17, 2021
- feat: function to generate poly(A) tail sequence · 444cc961
  MihaelaZavolan authored 3 years ago and Alex Kanitz committed 3 years ago
  
  444cc961
- feat: add sampling from transcript file · e8f8acc9
  Michele Garioni authored 3 years ago
  
  e8f8acc9
Nov 10, 2021
- Added transcript expression and annotation files · fd2973bc
  MihaelaZavolan authored 3 years ago and Alex Kanitz committed 3 years ago
  
  fd2973bc
- Merge branch 'feature' into 'main' · a9c9bba1
  Michele Garioni authored 3 years ago
  
  doc: add .gitignore See merge request !1
  a9c9bba1
- Merge branch 'add-license' into 'main' · c54a0a48
  Gregory Zaugg authored 3 years ago
  
  chore: added MIT license See merge request !4
  c54a0a48
- chore: added MIT license · eab7a857
  TheRiPtide authored 3 years ago
  
  eab7a857
- Merge branch 'ci' into 'main' · 29c80236
  Gregory Zaugg authored 3 years ago
  
  ci: implement ci pipeline See merge request !2
  29c80236
- ci: implement ci pipeline · d2315040
  Gregory Zaugg authored 3 years ago
  
  d2315040
Nov 08, 2021
- doc: add .gitignore · 775cde0f
  Michele Garioni authored 3 years ago
  
  775cde0f
Nov 02, 2021
- Update README.md · 3d645190
  MihaelaZavolan authored 3 years ago
  
  3d645190
- Update README.md · c1ffa8a1
  MihaelaZavolan authored 3 years ago
  
  c1ffa8a1
- Update README.md · d6c0c23b
  MihaelaZavolan authored 3 years ago
  
  d6c0c23b
- Update README.md · 188b8d62
  MihaelaZavolan authored 3 years ago
  
  188b8d62