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<title>1->0</title>
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<!-- 10->1 -->
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<title>10->1</title>
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<!-- 11 -->
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<title>11->1</title>
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<!-- 12 -->
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<title>12->1</title>
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<title>13</title>
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<title>13->1</title>
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<!-- 20 -->
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<title>20</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M933.5,-468C933.5,-468 902.5,-468 902.5,-468 896.5,-468 890.5,-462 890.5,-456 890.5,-456 890.5,-444 890.5,-444 890.5,-438 896.5,-432 902.5,-432 902.5,-432 933.5,-432 933.5,-432 939.5,-432 945.5,-438 945.5,-444 945.5,-444 945.5,-456 945.5,-456 945.5,-462 939.5,-468 933.5,-468"/>
<text text-anchor="middle" x="918" y="-447.5" font-family="sans" font-size="10.00" fill="#000000">star_rpm</text>
</g>
<!-- 20->1 -->
<g id="edge20" class="edge">
<title>20->1</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M931.5988,-431.8479C968.189,-380.6481 1061.2944,-233.0369 990,-144 966.4535,-114.5937 861.6864,-100.1145 798.2917,-93.9252"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="798.3938,-90.4194 788.1099,-92.9674 797.7381,-97.3887 798.3938,-90.4194"/>
</g>
<!-- 48 -->
<g id="node49" class="node">
<title>48</title>
<path fill="none" stroke="#5692d8" stroke-width="2" d="M1357,-396C1357,-396 1251,-396 1251,-396 1245,-396 1239,-390 1239,-384 1239,-384 1239,-372 1239,-372 1239,-366 1245,-360 1251,-360 1251,-360 1357,-360 1357,-360 1363,-360 1369,-366 1369,-372 1369,-372 1369,-384 1369,-384 1369,-390 1363,-396 1357,-396"/>
<text text-anchor="middle" x="1304" y="-381" font-family="sans" font-size="10.00" fill="#000000">rename_star_rpm_for_alfa</text>
<text text-anchor="middle" x="1304" y="-370" font-family="sans" font-size="10.00" fill="#000000">unique: Unique</text>
</g>
<!-- 20->48 -->
<g id="edge89" class="edge">
<title>20->48</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M945.5144,-435.5149C948.6601,-434.1905 951.8639,-432.9809 955,-432 1004.6733,-416.4629 1141.9601,-397.7834 1228.8032,-386.9632"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1229.379,-390.4187 1238.8727,-385.7156 1228.5182,-383.4718 1229.379,-390.4187"/>
</g>
<!-- 49 -->
<g id="node50" class="node">
<title>49</title>
<path fill="none" stroke="#5692d8" stroke-width="2" d="M1518,-396C1518,-396 1412,-396 1412,-396 1406,-396 1400,-390 1400,-384 1400,-384 1400,-372 1400,-372 1400,-366 1406,-360 1412,-360 1412,-360 1518,-360 1518,-360 1524,-360 1530,-366 1530,-372 1530,-372 1530,-384 1530,-384 1530,-390 1524,-396 1518,-396"/>
<text text-anchor="middle" x="1465" y="-381" font-family="sans" font-size="10.00" fill="#000000">rename_star_rpm_for_alfa</text>
<text text-anchor="middle" x="1465" y="-370" font-family="sans" font-size="10.00" fill="#000000">unique: UniqueMultiple</text>
</g>
<!-- 20->49 -->
<g id="edge90" class="edge">
<title>20->49</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M945.8624,-435.13C948.8882,-433.9145 951.9698,-432.8349 955,-432 1136.9022,-381.8842 1191.2857,-423.1619 1378,-396 1381.8397,-395.4414 1385.7649,-394.8188 1389.7216,-394.1502"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1390.3544,-397.5926 1399.5915,-392.4034 1389.1345,-390.6997 1390.3544,-397.5926"/>
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
<!-- 21 -->
<g id="node22" class="node">
<title>21</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M1479.5,-468C1479.5,-468 1448.5,-468 1448.5,-468 1442.5,-468 1436.5,-462 1436.5,-456 1436.5,-456 1436.5,-444 1436.5,-444 1436.5,-438 1442.5,-432 1448.5,-432 1448.5,-432 1479.5,-432 1479.5,-432 1485.5,-432 1491.5,-438 1491.5,-444 1491.5,-444 1491.5,-456 1491.5,-456 1491.5,-462 1485.5,-468 1479.5,-468"/>
<text text-anchor="middle" x="1464" y="-447.5" font-family="sans" font-size="10.00" fill="#000000">star_rpm</text>
</g>
<!-- 21->1 -->
<g id="edge21" class="edge">
<title>21->1</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1436.2499,-447.2272C1380.7817,-441.1241 1259.0457,-424.7366 1230,-396 1148.0822,-314.9538 1254.8249,-220.8967 1169,-144 1141.7766,-119.6086 903.3729,-100.5248 798.336,-93.2227"/>
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</g>
<!-- 50 -->
<g id="node51" class="node">
<title>50</title>
<path fill="none" stroke="#5692d8" stroke-width="2" d="M1916,-396C1916,-396 1810,-396 1810,-396 1804,-396 1798,-390 1798,-384 1798,-384 1798,-372 1798,-372 1798,-366 1804,-360 1810,-360 1810,-360 1916,-360 1916,-360 1922,-360 1928,-366 1928,-372 1928,-372 1928,-384 1928,-384 1928,-390 1922,-396 1916,-396"/>
<text text-anchor="middle" x="1863" y="-381" font-family="sans" font-size="10.00" fill="#000000">rename_star_rpm_for_alfa</text>
<text text-anchor="middle" x="1863" y="-370" font-family="sans" font-size="10.00" fill="#000000">unique: Unique</text>
</g>
<!-- 21->50 -->
<g id="edge91" class="edge">
<title>21->50</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1491.7401,-444.9943C1552.2965,-434.0668 1698.0829,-407.7595 1787.8967,-391.5525"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1788.5344,-394.994 1797.7539,-389.7737 1787.2912,-388.1053 1788.5344,-394.994"/>
</g>
<!-- 51 -->
<g id="node52" class="node">
<title>51</title>
<path fill="none" stroke="#5692d8" stroke-width="2" d="M2064,-396C2064,-396 1958,-396 1958,-396 1952,-396 1946,-390 1946,-384 1946,-384 1946,-372 1946,-372 1946,-366 1952,-360 1958,-360 1958,-360 2064,-360 2064,-360 2070,-360 2076,-366 2076,-372 2076,-372 2076,-384 2076,-384 2076,-390 2070,-396 2064,-396"/>
<text text-anchor="middle" x="2011" y="-381" font-family="sans" font-size="10.00" fill="#000000">rename_star_rpm_for_alfa</text>
<text text-anchor="middle" x="2011" y="-370" font-family="sans" font-size="10.00" fill="#000000">unique: UniqueMultiple</text>
</g>
<!-- 21->51 -->
<g id="edge92" class="edge">
<title>21->51</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1491.6324,-448.0589C1563.3904,-442.7615 1761.6282,-426.4906 1935.8683,-396.086"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1936.4844,-399.5315 1945.7238,-394.3464 1935.2676,-392.638 1936.4844,-399.5315"/>
<!-- 22 -->
<g id="node23" class="node">
<title>22</title>
<path fill="none" stroke="#d86656" stroke-width="2" d="M1689.5,-180C1689.5,-180 1612.5,-180 1612.5,-180 1606.5,-180 1600.5,-174 1600.5,-168 1600.5,-168 1600.5,-156 1600.5,-156 1600.5,-150 1606.5,-144 1612.5,-144 1612.5,-144 1689.5,-144 1689.5,-144 1695.5,-144 1701.5,-150 1701.5,-156 1701.5,-156 1701.5,-168 1701.5,-168 1701.5,-174 1695.5,-180 1689.5,-180"/>
<text text-anchor="middle" x="1651" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">alfa_concat_results</text>
<!-- 22->1 -->
<g id="edge22" class="edge">
<title>22->1</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1600.2464,-157.9487C1441.5815,-145.2837 956.1521,-106.5354 798.8019,-93.9753"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="798.7299,-90.4585 788.4831,-93.1516 798.1729,-97.4363 798.7299,-90.4585"/>
<g id="node24" class="node">
<title>23</title>
<path fill="none" stroke="#5673d8" stroke-width="2" d="M227.5,-180C227.5,-180 134.5,-180 134.5,-180 128.5,-180 122.5,-174 122.5,-168 122.5,-168 122.5,-156 122.5,-156 122.5,-150 128.5,-144 134.5,-144 134.5,-144 227.5,-144 227.5,-144 233.5,-144 239.5,-150 239.5,-156 239.5,-156 239.5,-168 239.5,-168 239.5,-174 233.5,-180 227.5,-180"/>
<text text-anchor="middle" x="181" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">prepare_multiqc_config</text>
<!-- 23->1 -->
<g id="edge23" class="edge">
<title>23->1</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M239.8233,-146.7826C244.6034,-145.7638 249.3728,-144.8191 254,-144 415.9214,-115.3363 610.5087,-99.4553 699.8193,-93.1863"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="700.1898,-96.6692 709.9241,-92.4867 699.7062,-89.6859 700.1898,-96.6692"/>
<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
<path fill="none" stroke="#bed856" stroke-width="2" d="M1292.5,-324C1292.5,-324 1233.5,-324 1233.5,-324 1227.5,-324 1221.5,-318 1221.5,-312 1221.5,-312 1221.5,-300 1221.5,-300 1221.5,-294 1227.5,-288 1233.5,-288 1233.5,-288 1292.5,-288 1292.5,-288 1298.5,-288 1304.5,-294 1304.5,-300 1304.5,-300 1304.5,-312 1304.5,-312 1304.5,-318 1298.5,-324 1292.5,-324"/>
<text text-anchor="middle" x="1263" y="-309" font-family="sans" font-size="10.00" fill="#000000">sort_bed_4_big</text>
<text text-anchor="middle" x="1263" y="-298" font-family="sans" font-size="10.00" fill="#000000">strand: plus</text>
</g>
<!-- 24->2 -->
<g id="edge24" class="edge">
<title>24->2</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1304.8785,-288.5708C1328.8198,-278.6068 1359.0413,-266.0291 1384.4348,-255.4607"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1386.0201,-258.592 1393.9076,-251.5182 1383.3304,-252.1293 1386.0201,-258.592"/>
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
<g id="node26" class="node">
<title>25</title>
<path fill="none" stroke="#56d8d0" stroke-width="2" d="M2154.5,-689C2154.5,-689 2053.5,-689 2053.5,-689 2047.5,-689 2041.5,-683 2041.5,-677 2041.5,-677 2041.5,-660 2041.5,-660 2041.5,-654 2047.5,-648 2053.5,-648 2053.5,-648 2154.5,-648 2154.5,-648 2160.5,-648 2166.5,-654 2166.5,-660 2166.5,-660 2166.5,-677 2166.5,-677 2166.5,-683 2160.5,-689 2154.5,-689"/>
<text text-anchor="middle" x="2104" y="-677" font-family="sans" font-size="10.00" fill="#000000">create_index_star</text>
<text text-anchor="middle" x="2104" y="-666" font-family="sans" font-size="10.00" fill="#000000">index_size: 75</text>
<text text-anchor="middle" x="2104" y="-655" font-family="sans" font-size="10.00" fill="#000000">organism: homo_sapiens</text>
</g>
<!-- 25->2 -->
<g id="edge25" class="edge">
<title>25->2</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2041.3603,-663.1749C1955.9554,-655.0738 1808.1874,-637.8165 1761,-612 1713.7893,-586.1707 1680,-575.8145 1680,-522 1680,-522 1680,-522 1680,-378 1680,-337.1184 1689.966,-316.8493 1661,-288 1607.232,-234.4487 1566.3755,-270.1408 1487.9182,-251.8789"/>
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</g>
<!-- 25->3 -->
<g id="edge27" class="edge">
<title>25->3</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2104,-647.6361C2104,-619.2216 2104,-566.7639 2104,-522 2104,-522 2104,-522 2104,-378 2104,-337.1184 2113.4398,-317.3681 2085,-288 2040.309,-241.8502 2005.6944,-268.5447 1938.8459,-251.9029"/>
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</g>
<!-- 25->4 -->
<g id="edge29" class="edge">
<title>25->4</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2041.1233,-658.0445C1931.7457,-638.0605 1718,-590.2734 1718,-522 1718,-522 1718,-522 1718,-378 1718,-336.6022 1722.1904,-318.3163 1694,-288 1694,-288 1635.0939,-267.6094 1589.6766,-251.8881"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1590.8106,-248.5769 1580.2158,-248.6132 1588.5208,-255.1918 1590.8106,-248.5769"/>
</g>
<!-- 25->5 -->
<g id="edge31" class="edge">
<title>25->5</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2144.8701,-647.9116C2186.1931,-623.8599 2244,-579.8715 2244,-522 2244,-522 2244,-522 2244,-378 2244,-337.1184 2254.1361,-316.6775 2225,-288 2167.517,-231.4217 2124.1462,-270.8194 2040.9493,-251.8734"/>
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</g>
<!-- 25->6 -->
<g id="edge33" class="edge">
<title>25->6</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2166.8375,-663.0924C2249.3908,-652.1517 2384,-619.3815 2384,-522 2384,-522 2384,-522 2384,-378 2384,-337.1184 2394.5931,-316.2056 2365,-288 2294.5983,-220.8992 2242.6159,-273.301 2142.9204,-251.8357"/>
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</g>
<!-- 25->7 -->
<g id="edge35" class="edge">
<title>25->7</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2166.8146,-662.0602C2252.1164,-652.6611 2399.6214,-633.9005 2449,-612 2507.6913,-585.9692 2562,-586.2049 2562,-522 2562,-522 2562,-522 2562,-378 2562,-335.3959 2560.6703,-316.4974 2529,-288 2516.8301,-277.0493 2425.8533,-256.7992 2366.2078,-244.4497"/>
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<!-- 25->8 -->
<g id="edge37" class="edge">
<title>25->8</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2166.8782,-659.9276C2284.0442,-642.181 2524,-596.7154 2524,-522 2524,-522 2524,-522 2524,-378 2524,-337.1184 2534.7671,-316.0219 2505,-288 2465.412,-250.7329 2316.2892,-262.7847 2263,-252 2257.1696,-250.82 2251.0981,-249.4598 2245.0748,-248.0266"/>
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<!-- 25->9 -->
<g id="edge39" class="edge">
<title>25->9</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2166.6966,-664.3304C2264.0804,-657.0782 2446.5765,-640.1625 2505,-612 2557.3918,-586.745 2600,-580.1611 2600,-522 2600,-522 2600,-522 2600,-378 2600,-333.4756 2586.9729,-319.986 2556,-288 2541.8754,-273.4134 2522.9504,-261.9134 2505.2388,-253.3421"/>
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<!-- 42 -->
<g id="node43" class="node">
<title>42</title>
<path fill="none" stroke="#97d856" stroke-width="2" d="M923.5,-612C923.5,-612 834.5,-612 834.5,-612 828.5,-612 822.5,-606 822.5,-600 822.5,-600 822.5,-588 822.5,-588 822.5,-582 828.5,-576 834.5,-576 834.5,-576 923.5,-576 923.5,-576 929.5,-576 935.5,-582 935.5,-588 935.5,-588 935.5,-600 935.5,-600 935.5,-606 929.5,-612 923.5,-612"/>
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<!-- 25->42 -->
<g id="edge79" class="edge">
<title>25->42</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2041.1437,-664.6773C1831.9638,-651.9558 1160.438,-611.116 945.7009,-598.0565"/>
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<!-- 44 -->
<g id="node45" class="node">
<title>44</title>
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</g>
<!-- 25->44 -->
<g id="edge82" class="edge">
<title>25->44</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2041.2506,-662.3082C1897.814,-648.1545 1547.5911,-613.5961 1407.9188,-599.8138"/>
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<!-- 63 -->
<g id="node64" class="node">
<title>63</title>
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<!-- 25->63 -->
<g id="edge111" class="edge">
<title>25->63</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2041.2327,-664.2134C1926.9104,-655.8563 1693.8957,-636.0786 1666,-612 1605.2719,-559.5817 1598.3365,-456.0229 1598.7931,-406.148"/>
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<g id="node27" class="node">
<title>26</title>
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</g>
<!-- 26->3 -->
<g id="edge26" class="edge">
<title>26->3</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1579.5478,-290.5942C1582.7249,-289.6444 1585.9006,-288.7651 1589,-288 1693.5493,-262.1921 1726.379,-277.6181 1834.8587,-252.006"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1835.9983,-255.3312 1844.8915,-249.5726 1834.3483,-248.5284 1835.9983,-255.3312"/>
<g id="node28" class="node">
<title>27</title>
<path fill="none" stroke="#bed856" stroke-width="2" d="M1393.5,-324C1393.5,-324 1334.5,-324 1334.5,-324 1328.5,-324 1322.5,-318 1322.5,-312 1322.5,-312 1322.5,-300 1322.5,-300 1322.5,-294 1328.5,-288 1334.5,-288 1334.5,-288 1393.5,-288 1393.5,-288 1399.5,-288 1405.5,-294 1405.5,-300 1405.5,-300 1405.5,-312 1405.5,-312 1405.5,-318 1399.5,-324 1393.5,-324"/>
<text text-anchor="middle" x="1364" y="-309" font-family="sans" font-size="10.00" fill="#000000">sort_bed_4_big</text>
<text text-anchor="middle" x="1364" y="-298" font-family="sans" font-size="10.00" fill="#000000">strand: minus</text>
</g>
<!-- 27->4 -->
<g id="edge28" class="edge">
<title>27->4</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1405.6773,-288.7542C1429.9435,-278.713 1460.7364,-265.9711 1486.5101,-255.3062"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1487.8552,-258.5374 1495.7571,-251.4798 1485.1787,-252.0693 1487.8552,-258.5374"/>
<g id="node29" class="node">
<title>28</title>
<path fill="none" stroke="#bed856" stroke-width="2" d="M1817.5,-324C1817.5,-324 1758.5,-324 1758.5,-324 1752.5,-324 1746.5,-318 1746.5,-312 1746.5,-312 1746.5,-300 1746.5,-300 1746.5,-294 1752.5,-288 1758.5,-288 1758.5,-288 1817.5,-288 1817.5,-288 1823.5,-288 1829.5,-294 1829.5,-300 1829.5,-300 1829.5,-312 1829.5,-312 1829.5,-318 1823.5,-324 1817.5,-324"/>
<text text-anchor="middle" x="1788" y="-309" font-family="sans" font-size="10.00" fill="#000000">sort_bed_4_big</text>
<text text-anchor="middle" x="1788" y="-298" font-family="sans" font-size="10.00" fill="#000000">strand: minus</text>
</g>
<!-- 28->5 -->
<g id="edge30" class="edge">
<title>28->5</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1829.6473,-291.0816C1860.8353,-279.9098 1903.6984,-264.5558 1937.115,-252.5857"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1938.4806,-255.8144 1946.7145,-249.147 1936.1199,-249.2244 1938.4806,-255.8144"/>
<g id="node30" class="node">
<title>29</title>
<path fill="none" stroke="#bed856" stroke-width="2" d="M2063.5,-324C2063.5,-324 2004.5,-324 2004.5,-324 1998.5,-324 1992.5,-318 1992.5,-312 1992.5,-312 1992.5,-300 1992.5,-300 1992.5,-294 1998.5,-288 2004.5,-288 2004.5,-288 2063.5,-288 2063.5,-288 2069.5,-288 2075.5,-294 2075.5,-300 2075.5,-300 2075.5,-312 2075.5,-312 2075.5,-318 2069.5,-324 2063.5,-324"/>
<text text-anchor="middle" x="2034" y="-309" font-family="sans" font-size="10.00" fill="#000000">sort_bed_4_big</text>
<text text-anchor="middle" x="2034" y="-298" font-family="sans" font-size="10.00" fill="#000000">strand: plus</text>
</g>
<!-- 29->6 -->
<g id="edge32" class="edge">
<title>29->6</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2048.3835,-287.8314C2054.9486,-279.5386 2062.8507,-269.557 2070.0578,-260.4533"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="2072.9599,-262.4262 2076.4228,-252.4133 2067.4716,-258.0813 2072.9599,-262.4262"/>
<g id="node31" class="node">
<title>30</title>
<path fill="none" stroke="#bed856" stroke-width="2" d="M2343.5,-324C2343.5,-324 2284.5,-324 2284.5,-324 2278.5,-324 2272.5,-318 2272.5,-312 2272.5,-312 2272.5,-300 2272.5,-300 2272.5,-294 2278.5,-288 2284.5,-288 2284.5,-288 2343.5,-288 2343.5,-288 2349.5,-288 2355.5,-294 2355.5,-300 2355.5,-300 2355.5,-312 2355.5,-312 2355.5,-318 2349.5,-324 2343.5,-324"/>
<text text-anchor="middle" x="2314" y="-309" font-family="sans" font-size="10.00" fill="#000000">sort_bed_4_big</text>
<text text-anchor="middle" x="2314" y="-298" font-family="sans" font-size="10.00" fill="#000000">strand: plus</text>
</g>
<!-- 30->7 -->
<g id="edge34" class="edge">
<title>30->7</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2314,-287.8314C2314,-280.131 2314,-270.9743 2314,-262.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="2317.5001,-262.4132 2314,-252.4133 2310.5001,-262.4133 2317.5001,-262.4132"/>
<!-- 31 -->
<g id="node32" class="node">
<title>31</title>
<path fill="none" stroke="#bed856" stroke-width="2" d="M2203.5,-324C2203.5,-324 2144.5,-324 2144.5,-324 2138.5,-324 2132.5,-318 2132.5,-312 2132.5,-312 2132.5,-300 2132.5,-300 2132.5,-294 2138.5,-288 2144.5,-288 2144.5,-288 2203.5,-288 2203.5,-288 2209.5,-288 2215.5,-294 2215.5,-300 2215.5,-300 2215.5,-312 2215.5,-312 2215.5,-318 2209.5,-324 2203.5,-324"/>
<text text-anchor="middle" x="2174" y="-309" font-family="sans" font-size="10.00" fill="#000000">sort_bed_4_big</text>
<text text-anchor="middle" x="2174" y="-298" font-family="sans" font-size="10.00" fill="#000000">strand: minus</text>
</g>
<!-- 31->8 -->
<g id="edge36" class="edge">
<title>31->8</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2178.7945,-287.8314C2180.8489,-280.0463 2183.296,-270.7729 2185.5756,-262.1347"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="2188.9735,-262.9753 2188.1409,-252.4133 2182.2052,-261.1892 2188.9735,-262.9753"/>
<!-- 32 -->
<g id="node33" class="node">
<title>32</title>
<path fill="none" stroke="#bed856" stroke-width="2" d="M2483.5,-324C2483.5,-324 2424.5,-324 2424.5,-324 2418.5,-324 2412.5,-318 2412.5,-312 2412.5,-312 2412.5,-300 2412.5,-300 2412.5,-294 2418.5,-288 2424.5,-288 2424.5,-288 2483.5,-288 2483.5,-288 2489.5,-288 2495.5,-294 2495.5,-300 2495.5,-300 2495.5,-312 2495.5,-312 2495.5,-318 2489.5,-324 2483.5,-324"/>
<text text-anchor="middle" x="2454" y="-309" font-family="sans" font-size="10.00" fill="#000000">sort_bed_4_big</text>
<text text-anchor="middle" x="2454" y="-298" font-family="sans" font-size="10.00" fill="#000000">strand: minus</text>
</g>
<!-- 32->9 -->
<g id="edge38" class="edge">
<title>32->9</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2454,-287.8314C2454,-280.131 2454,-270.9743 2454,-262.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="2457.5001,-262.4132 2454,-252.4133 2450.5001,-262.4133 2457.5001,-262.4132"/>
<!-- 33 -->
<g id="node34" class="node">
<title>33</title>
<path fill="none" stroke="#56a2d8" stroke-width="2" d="M280,-838C280,-838 12,-838 12,-838 6,-838 0,-832 0,-826 0,-826 0,-809 0,-809 0,-803 6,-797 12,-797 12,-797 280,-797 280,-797 286,-797 292,-803 292,-809 292,-809 292,-826 292,-826 292,-832 286,-838 280,-838"/>
<text text-anchor="middle" x="146" y="-826" font-family="sans" font-size="10.00" fill="#000000">start</text>
<text text-anchor="middle" x="146" y="-815" font-family="sans" font-size="10.00" fill="#000000">mate: fq1</text>
<text text-anchor="middle" x="146" y="-804" font-family="sans" font-size="10.00" fill="#000000">sample: synthetic_10_reads_paired_synthetic_10_reads_paired</text>
</g>
<!-- 33->10 -->
<g id="edge40" class="edge">
<title>33->10</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M136.1255,-796.8743C116.7494,-756.4018 73.7511,-666.5877 52.0567,-621.2726"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="55.1181,-619.5617 47.643,-612.0534 48.8043,-622.5844 55.1181,-619.5617"/>
</g>
<!-- 52 -->
<g id="node53" class="node">
<title>52</title>
<path fill="none" stroke="#d8b456" stroke-width="2" d="M569,-761C569,-761 443,-761 443,-761 437,-761 431,-755 431,-749 431,-749 431,-737 431,-737 431,-731 437,-725 443,-725 443,-725 569,-725 569,-725 575,-725 581,-731 581,-737 581,-737 581,-749 581,-749 581,-755 575,-761 569,-761"/>
<text text-anchor="middle" x="506" y="-740.5" font-family="sans" font-size="10.00" fill="#000000">pe_remove_adapters_cutadapt</text>
</g>
<!-- 33->52 -->
<g id="edge93" class="edge">
<title>33->52</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M245.3246,-796.9453C300.4611,-785.5351 368.3312,-771.4898 420.9952,-760.5913"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="421.8975,-763.9788 430.9807,-758.5248 420.4789,-757.124 421.8975,-763.9788"/>
<g id="node35" class="node">
<title>34</title>
<path fill="none" stroke="#56a2d8" stroke-width="2" d="M605,-838C605,-838 325,-838 325,-838 319,-838 313,-832 313,-826 313,-826 313,-809 313,-809 313,-803 319,-797 325,-797 325,-797 605,-797 605,-797 611,-797 617,-803 617,-809 617,-809 617,-826 617,-826 617,-832 611,-838 605,-838"/>
<text text-anchor="middle" x="465" y="-826" font-family="sans" font-size="10.00" fill="#000000">start</text>
<text text-anchor="middle" x="465" y="-815" font-family="sans" font-size="10.00" fill="#000000">mate: fq1</text>
<text text-anchor="middle" x="465" y="-804" font-family="sans" font-size="10.00" fill="#000000">sample: synthetic_10_reads_mate_1_synthetic_10_reads_mate_1</text>
</g>
<!-- 34->11 -->
<g id="edge41" class="edge">
<title>34->11</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M445.8117,-796.7822C421.0352,-770.0308 377.9109,-723.469 350.9944,-694.407"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="353.224,-691.6635 343.8611,-686.7051 348.0883,-696.4201 353.224,-691.6635"/>
</g>
<!-- 54 -->
<g id="node55" class="node">
<title>54</title>
<path fill="none" stroke="#56d8c1" stroke-width="2" d="M751,-761C751,-761 641,-761 641,-761 635,-761 629,-755 629,-749 629,-749 629,-737 629,-737 629,-731 635,-725 641,-725 641,-725 751,-725 751,-725 757,-725 763,-731 763,-737 763,-737 763,-749 763,-749 763,-755 757,-761 751,-761"/>
<text text-anchor="middle" x="696" y="-740.5" font-family="sans" font-size="10.00" fill="#000000">remove_adapters_cutadapt</text>
</g>
<!-- 34->54 -->
<g id="edge95" class="edge">
<title>34->54</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M528.7333,-796.9453C560.3206,-786.7581 598.4211,-774.4703 630.2754,-764.1969"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="631.5037,-767.4784 639.9466,-761.0778 629.355,-760.8163 631.5037,-767.4784"/>
<g id="node36" class="node">
<title>35</title>
<path fill="none" stroke="#56a2d8" stroke-width="2" d="M1042,-838C1042,-838 774,-838 774,-838 768,-838 762,-832 762,-826 762,-826 762,-809 762,-809 762,-803 768,-797 774,-797 774,-797 1042,-797 1042,-797 1048,-797 1054,-803 1054,-809 1054,-809 1054,-826 1054,-826 1054,-832 1048,-838 1042,-838"/>
<text text-anchor="middle" x="908" y="-826" font-family="sans" font-size="10.00" fill="#000000">start</text>
<text text-anchor="middle" x="908" y="-815" font-family="sans" font-size="10.00" fill="#000000">mate: fq2</text>
<text text-anchor="middle" x="908" y="-804" font-family="sans" font-size="10.00" fill="#000000">sample: synthetic_10_reads_paired_synthetic_10_reads_paired</text>
</g>
<!-- 35->12 -->
<g id="edge42" class="edge">
<title>35->12</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M952.972,-796.9453C978.5944,-785.2345 1010.29,-770.7478 1034.382,-759.7364"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1035.9021,-762.89 1043.5422,-755.5497 1032.9922,-756.5234 1035.9021,-762.89"/>
</g>
<!-- 35->52 -->
<g id="edge94" class="edge">
<title>35->52</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M797.3539,-796.9947C732.1855,-784.9175 651.0154,-769.8747 590.9142,-758.7366"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="591.5494,-755.2948 581.079,-756.9139 590.2738,-762.1776 591.5494,-755.2948"/>
<g id="node37" class="node">
<title>36</title>
<path fill="none" stroke="#56d892" stroke-width="2" d="M562,-686.5C562,-686.5 450,-686.5 450,-686.5 444,-686.5 438,-680.5 438,-674.5 438,-674.5 438,-662.5 438,-662.5 438,-656.5 444,-650.5 450,-650.5 450,-650.5 562,-650.5 562,-650.5 568,-650.5 574,-656.5 574,-662.5 574,-662.5 574,-674.5 574,-674.5 574,-680.5 568,-686.5 562,-686.5"/>
<text text-anchor="middle" x="506" y="-666" font-family="sans" font-size="10.00" fill="#000000">pe_remove_polya_cutadapt</text>
<!-- 36->13 -->
<g id="edge43" class="edge">
<title>36->13</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M441.1153,-650.4283C383.0432,-629.8279 307,-589.8908 307,-522 307,-522 307,-522 307,-378 307,-335.6562 288.4068,-289.6118 274.6094,-261.273"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="277.5809,-259.3907 269.9675,-252.0228 271.3245,-262.5304 277.5809,-259.3907"/>
<!-- 40 -->
<g id="node41" class="node">
<title>40</title>
<path fill="none" stroke="#d8a456" stroke-width="2" d="M644.5,-252C644.5,-252 541.5,-252 541.5,-252 535.5,-252 529.5,-246 529.5,-240 529.5,-240 529.5,-228 529.5,-228 529.5,-222 535.5,-216 541.5,-216 541.5,-216 644.5,-216 644.5,-216 650.5,-216 656.5,-222 656.5,-228 656.5,-228 656.5,-240 656.5,-240 656.5,-246 650.5,-252 644.5,-252"/>
<text text-anchor="middle" x="593" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">pe_quantification_salmon</text>
</g>
<!-- 36->40 -->
<g id="edge75" class="edge">
<title>36->40</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M506,-650.4571C506,-622.8072 506,-568.2899 506,-522 506,-522 506,-522 506,-450 506,-374.906 517.7221,-353.7497 554,-288 559.1957,-278.5834 565.7633,-268.882 572.0204,-260.3455"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="574.8955,-262.3458 578.1117,-252.2509 569.3022,-258.1367 574.8955,-262.3458"/>
</g>
<!-- 36->42 -->
<g id="edge80" class="edge">
<title>36->42</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M574.4139,-654.8356C642.1298,-641.3105 745.1289,-620.7383 812.257,-607.3307"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="813.181,-610.7154 822.3018,-605.3244 811.8099,-603.8509 813.181,-610.7154"/>
<!-- 37 -->
<g id="node38" class="node">
<title>37</title>
<path fill="none" stroke="#afd856" stroke-width="2" d="M457,-324C457,-324 373,-324 373,-324 367,-324 361,-318 361,-312 361,-312 361,-300 361,-300 361,-294 367,-288 373,-288 373,-288 457,-288 457,-288 463,-288 469,-294 469,-300 469,-300 469,-312 469,-312 469,-318 463,-324 457,-324"/>
<text text-anchor="middle" x="415" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">create_index_kallisto</text>
</g>
<!-- 37->13 -->
<g id="edge44" class="edge">
<title>37->13</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M375.887,-287.8314C355.2488,-278.2446 329.7516,-266.4008 307.9327,-256.2655"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="309.3756,-253.0766 298.8318,-252.038 306.4266,-259.4251 309.3756,-253.0766"/>
</g>
<!-- 37->14 -->
<g id="edge46" class="edge">
<title>37->14</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M420.2992,-287.8314C422.5698,-280.0463 425.2746,-270.7729 427.794,-262.1347"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="431.1894,-262.9933 430.6295,-252.4133 424.4694,-261.0332 431.1894,-262.9933"/>
<g id="node39" class="node">
<title>38</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M759,-686.5C759,-686.5 663,-686.5 663,-686.5 657,-686.5 651,-680.5 651,-674.5 651,-674.5 651,-662.5 651,-662.5 651,-656.5 657,-650.5 663,-650.5 663,-650.5 759,-650.5 759,-650.5 765,-650.5 771,-656.5 771,-662.5 771,-662.5 771,-674.5 771,-674.5 771,-680.5 765,-686.5 759,-686.5"/>
<text text-anchor="middle" x="711" y="-666" font-family="sans" font-size="10.00" fill="#000000">remove_polya_cutadapt</text>
<!-- 38->14 -->
<g id="edge45" class="edge">
<title>38->14</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M706.2344,-650.1441C699.4975,-622.5387 688,-568.5995 688,-522 688,-522 688,-522 688,-450 688,-409.0242 695.6837,-390.2097 668,-360 632.1028,-320.8273 601.1597,-348.476 554,-324 520.0424,-306.376 485.7772,-278.9165 462.9864,-258.9614"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="465.2241,-256.2677 455.4228,-252.2444 460.5759,-261.5017 465.2241,-256.2677"/>
<!-- 41 -->
<g id="node42" class="node">
<title>41</title>
<path fill="none" stroke="#68d856" stroke-width="2" d="M773.5,-252C773.5,-252 686.5,-252 686.5,-252 680.5,-252 674.5,-246 674.5,-240 674.5,-240 674.5,-228 674.5,-228 674.5,-222 680.5,-216 686.5,-216 686.5,-216 773.5,-216 773.5,-216 779.5,-216 785.5,-222 785.5,-228 785.5,-228 785.5,-240 785.5,-240 785.5,-246 779.5,-252 773.5,-252"/>
<text text-anchor="middle" x="730" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">quantification_salmon</text>
</g>
<!-- 38->41 -->
<g id="edge77" class="edge">
<title>38->41</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M714.108,-650.0609C718.5016,-622.3494 726,-568.2763 726,-522 726,-522 726,-522 726,-378 726,-337.8605 727.5722,-291.4516 728.7453,-262.4112"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="732.2521,-262.3179 729.1712,-252.1809 725.2581,-262.0266 732.2521,-262.3179"/>
</g>
<!-- 38->44 -->
<g id="edge83" class="edge">
<title>38->44</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M771.0215,-661.4912C893.0937,-647.2367 1168.9639,-615.023 1290.0933,-600.8786"/>
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714
715
716
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760
<!-- 39 -->
<g id="node40" class="node">
<title>39</title>
<path fill="none" stroke="#56d882" stroke-width="2" d="M1120,-396C1120,-396 1044,-396 1044,-396 1038,-396 1032,-390 1032,-384 1032,-384 1032,-372 1032,-372 1032,-366 1038,-360 1044,-360 1044,-360 1120,-360 1120,-360 1126,-360 1132,-366 1132,-372 1132,-372 1132,-384 1132,-384 1132,-390 1126,-396 1120,-396"/>
<text text-anchor="middle" x="1082" y="-375.5" font-family="sans" font-size="10.00" fill="#000000">merge_TIN_scores</text>
</g>
<!-- 39->15 -->
<g id="edge47" class="edge">
<title>39->15</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1082,-359.9555C1082,-322.3938 1082,-235.5541 1082,-190.4103"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1085.5001,-190.145 1082,-180.1451 1078.5001,-190.1451 1085.5001,-190.145"/>
</g>
<!-- 40->16 -->
<g id="edge48" class="edge">
<title>40->16</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M632.3654,-215.8314C653.1367,-206.2446 678.7983,-194.4008 700.7581,-184.2655"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="702.3048,-187.4065 709.9177,-180.038 699.3714,-181.0508 702.3048,-187.4065"/>
</g>
<!-- 40->17 -->
<g id="edge50" class="edge">
<title>40->17</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M656.5811,-218.0084C659.4248,-217.3235 662.2412,-216.6513 665,-216 680.7453,-212.283 761.2088,-194.4393 825.2937,-180.2665"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="826.4175,-183.6026 835.4259,-178.0261 824.9061,-176.7677 826.4175,-183.6026"/>
</g>
<!-- 40->18 -->
<g id="edge52" class="edge">
<title>40->18</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M547.3261,-215.8314C522.9032,-206.1162 492.6534,-194.0831 466.9516,-183.8592"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="467.931,-180.4821 457.3455,-180.038 465.3437,-186.9864 467.931,-180.4821"/>
</g>
<!-- 40->19 -->
<g id="edge54" class="edge">
<title>40->19</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M590.9813,-215.8314C590.1257,-208.131 589.1083,-198.9743 588.1574,-190.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="591.6289,-189.9656 587.0459,-180.4133 584.6717,-190.7386 591.6289,-189.9656"/>
</g>
<!-- 41->16 -->
<g id="edge49" class="edge">
<title>41->16</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M734.7945,-215.8314C736.8489,-208.0463 739.296,-198.7729 741.5756,-190.1347"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="744.9735,-190.9753 744.1409,-180.4133 738.2052,-189.1892 744.9735,-190.9753"/>
</g>
<!-- 41->17 -->
<g id="edge51" class="edge">
<title>41->17</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M774.9169,-215.8314C798.935,-206.1162 828.6834,-194.0831 853.9592,-183.8592"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="855.4482,-187.0325 863.4061,-180.038 852.8233,-180.5432 855.4482,-187.0325"/>
</g>
<!-- 41->18 -->
<g id="edge53" class="edge">
<title>41->18</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M674.3881,-218.3641C671.2168,-217.5459 668.0708,-216.7522 665,-216 648.7917,-212.0298 566.1324,-194.4694 499.641,-180.4364"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="500.0472,-176.9451 489.54,-178.3055 498.6022,-183.7944 500.0472,-176.9451"/>
</g>
<!-- 41->19 -->
<g id="edge55" class="edge">
<title>41->19</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M693.4104,-215.8314C674.2761,-206.3302 650.6771,-194.6121 630.3878,-184.5374"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="631.8397,-181.3506 621.3265,-180.038 628.7265,-187.6203 631.8397,-181.3506"/>
</g>
<!-- 42->20 -->
<g id="edge56" class="edge">
<title>42->20</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M824.7405,-575.9128C808.4149,-567.642 792.3643,-556.0115 783,-540 774.9225,-526.1886 774.0299,-517.2491 783,-504 804.5513,-472.168 848.2339,-459.0988 880.0914,-453.734"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="881.0203,-457.1341 890.3929,-452.194 879.9853,-450.211 881.0203,-457.1341"/>
762
763
764
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769
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779
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795
796
797
798
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800
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803
<!-- 43 -->
<g id="node44" class="node">
<title>43</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M954,-540C954,-540 804,-540 804,-540 798,-540 792,-534 792,-528 792,-528 792,-516 792,-516 792,-510 798,-504 804,-504 804,-504 954,-504 954,-504 960,-504 966,-510 966,-516 966,-516 966,-528 966,-528 966,-534 960,-540 954,-540"/>
<text text-anchor="middle" x="879" y="-525" font-family="sans" font-size="10.00" fill="#000000">index_genomic_alignment_samtools</text>
<text text-anchor="middle" x="879" y="-514" font-family="sans" font-size="10.00" fill="#000000">seqmode: pe</text>
</g>
<!-- 42->43 -->
<g id="edge81" class="edge">
<title>42->43</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M879,-575.8314C879,-568.131 879,-558.9743 879,-550.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="882.5001,-550.4132 879,-540.4133 875.5001,-550.4133 882.5001,-550.4132"/>
</g>
<!-- 55 -->
<g id="node56" class="node">
<title>55</title>
<path fill="none" stroke="#d87556" stroke-width="2" d="M1064,-468C1064,-468 976,-468 976,-468 970,-468 964,-462 964,-456 964,-456 964,-444 964,-444 964,-438 970,-432 976,-432 976,-432 1064,-432 1064,-432 1070,-432 1076,-438 1076,-444 1076,-444 1076,-456 1076,-456 1076,-462 1070,-468 1064,-468"/>
<text text-anchor="middle" x="1020" y="-447.5" font-family="sans" font-size="10.00" fill="#000000">calculate_TIN_scores</text>
</g>
<!-- 42->55 -->
<g id="edge96" class="edge">
<title>42->55</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M923.3895,-575.9625C941.0874,-567.1234 960.625,-555.0933 975,-540 991.9283,-522.2258 1003.8302,-496.8505 1011.1237,-477.5724"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1014.4325,-478.714 1014.5198,-468.1195 1007.8447,-476.3472 1014.4325,-478.714"/>
</g>
<!-- 43->20 -->
<g id="edge57" class="edge">
<title>43->20</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M888.8413,-503.8314C893.1957,-495.7925 898.4098,-486.1666 903.2169,-477.2918"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="906.3408,-478.8732 908.0261,-468.4133 900.1857,-475.5392 906.3408,-478.8732"/>
</g>
<!-- 43->55 -->
<g id="edge97" class="edge">
<title>43->55</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M914.5803,-503.8314C933.0325,-494.4089 955.7545,-482.8062 975.373,-472.7883"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="977.1168,-475.8278 984.4311,-468.1628 973.9333,-469.5935 977.1168,-475.8278"/>
</g>
<!-- 44->21 -->
<g id="edge58" class="edge">
<title>44->21</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1397.8953,-576.4505C1415.1813,-567.9496 1433.2316,-556.0316 1445,-540 1458.0158,-522.2691 1462.5259,-497.5652 1463.9152,-478.5241"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1467.4206,-478.4934 1464.4068,-468.3363 1460.4288,-478.1559 1467.4206,-478.4934"/>
805
806
807
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809
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811
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813
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815
816
817
818
819
820
821
822
823
824
825
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827
828
829
830
831
832
833
834
835
836
837
838
839
840
<!-- 45 -->
<g id="node46" class="node">
<title>45</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M1424,-540C1424,-540 1274,-540 1274,-540 1268,-540 1262,-534 1262,-528 1262,-528 1262,-516 1262,-516 1262,-510 1268,-504 1274,-504 1274,-504 1424,-504 1424,-504 1430,-504 1436,-510 1436,-516 1436,-516 1436,-528 1436,-528 1436,-534 1430,-540 1424,-540"/>
<text text-anchor="middle" x="1349" y="-525" font-family="sans" font-size="10.00" fill="#000000">index_genomic_alignment_samtools</text>
<text text-anchor="middle" x="1349" y="-514" font-family="sans" font-size="10.00" fill="#000000">seqmode: se</text>
</g>
<!-- 44->45 -->
<g id="edge84" class="edge">
<title>44->45</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1349,-575.8314C1349,-568.131 1349,-558.9743 1349,-550.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1352.5001,-550.4132 1349,-540.4133 1345.5001,-550.4133 1352.5001,-550.4132"/>
</g>
<!-- 56 -->
<g id="node57" class="node">
<title>56</title>
<path fill="none" stroke="#d87556" stroke-width="2" d="M1194,-468C1194,-468 1106,-468 1106,-468 1100,-468 1094,-462 1094,-456 1094,-456 1094,-444 1094,-444 1094,-438 1100,-432 1106,-432 1106,-432 1194,-432 1194,-432 1200,-432 1206,-438 1206,-444 1206,-444 1206,-456 1206,-456 1206,-462 1200,-468 1194,-468"/>
<text text-anchor="middle" x="1150" y="-447.5" font-family="sans" font-size="10.00" fill="#000000">calculate_TIN_scores</text>
</g>
<!-- 44->56 -->
<g id="edge99" class="edge">
<title>44->56</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1312.8301,-575.9289C1294.3752,-566.1489 1271.8951,-553.3548 1253,-540 1224.9717,-520.19 1195.7599,-494.0605 1175.6354,-475.062"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1178.0432,-472.5218 1168.3888,-468.1578 1173.2146,-477.5898 1178.0432,-472.5218"/>
</g>
<!-- 45->21 -->
<g id="edge59" class="edge">
<title>45->21</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1378.0194,-503.8314C1393.0654,-494.4112 1411.5922,-482.8118 1427.5905,-472.7955"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1429.5615,-475.6909 1436.18,-467.4177 1425.8469,-469.7578 1429.5615,-475.6909"/>
</g>
<!-- 45->56 -->
<g id="edge100" class="edge">
<title>45->56</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1299.0408,-503.9243C1271.8363,-494.0815 1237.9983,-481.8386 1209.4438,-471.5073"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1210.5741,-468.1943 1199.9798,-468.0831 1208.1924,-474.7767 1210.5741,-468.1943"/>
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
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863
864
865
866
867
868
869
870
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875
876
877
878
879
880
881
882
883
884
885
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887
888
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893
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895
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897
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899
900
901
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903
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905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
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944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
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972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
<!-- 46 -->
<g id="node47" class="node">
<title>46</title>
<path fill="none" stroke="#56b1d8" stroke-width="2" d="M1691.5,-252C1691.5,-252 1610.5,-252 1610.5,-252 1604.5,-252 1598.5,-246 1598.5,-240 1598.5,-240 1598.5,-228 1598.5,-228 1598.5,-222 1604.5,-216 1610.5,-216 1610.5,-216 1691.5,-216 1691.5,-216 1697.5,-216 1703.5,-222 1703.5,-228 1703.5,-228 1703.5,-240 1703.5,-240 1703.5,-246 1697.5,-252 1691.5,-252"/>
<text text-anchor="middle" x="1651" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">alfa_qc_all_samples</text>
</g>
<!-- 46->22 -->
<g id="edge60" class="edge">
<title>46->22</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1651,-215.8314C1651,-208.131 1651,-198.9743 1651,-190.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1654.5001,-190.4132 1651,-180.4133 1647.5001,-190.4133 1654.5001,-190.4132"/>
</g>
<!-- 47 -->
<g id="node48" class="node">
<title>47</title>
<path fill="none" stroke="#56b1d8" stroke-width="2" d="M1814.5,-252C1814.5,-252 1733.5,-252 1733.5,-252 1727.5,-252 1721.5,-246 1721.5,-240 1721.5,-240 1721.5,-228 1721.5,-228 1721.5,-222 1727.5,-216 1733.5,-216 1733.5,-216 1814.5,-216 1814.5,-216 1820.5,-216 1826.5,-222 1826.5,-228 1826.5,-228 1826.5,-240 1826.5,-240 1826.5,-246 1820.5,-252 1814.5,-252"/>
<text text-anchor="middle" x="1774" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">alfa_qc_all_samples</text>
</g>
<!-- 47->22 -->
<g id="edge61" class="edge">
<title>47->22</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1742.9619,-215.8314C1727.2295,-206.6221 1707.9389,-195.3301 1691.0956,-185.4706"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1692.4265,-182.1941 1682.0282,-180.1628 1688.8902,-188.2352 1692.4265,-182.1941"/>
</g>
<!-- 48->24 -->
<g id="edge62" class="edge">
<title>48->24</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1293.654,-359.8314C1289.0763,-351.7925 1283.5948,-342.1666 1278.5412,-333.2918"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1281.4752,-331.3712 1273.4853,-324.4133 1275.3923,-334.8351 1281.4752,-331.3712"/>
</g>
<!-- 48->27 -->
<g id="edge64" class="edge">
<title>48->27</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1319.1405,-359.8314C1326.1217,-351.454 1334.5391,-341.3531 1342.1876,-332.1749"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1344.9425,-334.3362 1348.6556,-324.4133 1339.5649,-329.8548 1344.9425,-334.3362"/>
</g>
<!-- 58 -->
<g id="node59" class="node">
<title>58</title>
<path fill="none" stroke="#88d856" stroke-width="2" d="M1466,-324C1466,-324 1436,-324 1436,-324 1430,-324 1424,-318 1424,-312 1424,-312 1424,-300 1424,-300 1424,-294 1430,-288 1436,-288 1436,-288 1466,-288 1466,-288 1472,-288 1478,-294 1478,-300 1478,-300 1478,-312 1478,-312 1478,-318 1472,-324 1466,-324"/>
<text text-anchor="middle" x="1451" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">alfa_qc</text>
</g>
<!-- 48->58 -->
<g id="edge103" class="edge">
<title>48->58</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1341.3026,-359.9776C1360.8441,-350.508 1385.3678,-338.5805 1414.6491,-324.1529"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1416.4691,-327.1578 1423.8889,-319.595 1413.3723,-320.8801 1416.4691,-327.1578"/>
</g>
<!-- 49->26 -->
<g id="edge63" class="edge">
<title>49->26</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1483.421,-359.8314C1492.1529,-351.219 1502.7317,-340.7851 1512.2423,-331.4048"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1514.923,-333.6769 1519.5849,-324.1628 1510.0075,-328.6931 1514.923,-333.6769"/>
</g>
<!-- 49->28 -->
<g id="edge65" class="edge">
<title>49->28</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1530.3489,-362.0103C1533.2712,-361.325 1536.1652,-360.652 1539,-360 1606.9559,-344.369 1685.6371,-327.5125 1736.0669,-316.8669"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1737.0116,-320.2447 1746.0747,-314.7575 1735.5678,-313.3952 1737.0116,-320.2447"/>
</g>
<!-- 60 -->
<g id="node61" class="node">
<title>60</title>
<path fill="none" stroke="#88d856" stroke-width="2" d="M1640,-324C1640,-324 1610,-324 1610,-324 1604,-324 1598,-318 1598,-312 1598,-312 1598,-300 1598,-300 1598,-294 1604,-288 1610,-288 1610,-288 1640,-288 1640,-288 1646,-288 1652,-294 1652,-300 1652,-300 1652,-312 1652,-312 1652,-318 1646,-324 1640,-324"/>
<text text-anchor="middle" x="1625" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">alfa_qc</text>
</g>
<!-- 49->60 -->
<g id="edge107" class="edge">
<title>49->60</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1508.004,-359.9355C1529.9206,-350.5777 1557.1387,-338.7269 1588.8769,-323.9605"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1590.3725,-327.125 1597.948,-319.718 1587.4069,-320.7842 1590.3725,-327.125"/>
</g>
<!-- 50->29 -->
<g id="edge66" class="edge">
<title>50->29</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1906.1505,-359.8314C1929.4718,-350.0119 1958.4169,-337.8245 1982.865,-327.5305"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="1984.4814,-330.6476 1992.3396,-323.5412 1981.765,-324.1961 1984.4814,-330.6476"/>
</g>
<!-- 50->31 -->
<g id="edge68" class="edge">
<title>50->31</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1928.3576,-362.0475C1931.2775,-361.3521 1934.1687,-360.6669 1937,-360 2000.8505,-344.9611 2074.541,-328.2761 2122.5806,-317.4887"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="2123.4384,-320.8833 2132.4296,-315.279 2121.906,-314.0531 2123.4384,-320.8833"/>
</g>
<!-- 59 -->
<g id="node60" class="node">
<title>59</title>
<path fill="none" stroke="#88d856" stroke-width="2" d="M1890,-324C1890,-324 1860,-324 1860,-324 1854,-324 1848,-318 1848,-312 1848,-312 1848,-300 1848,-300 1848,-294 1854,-288 1860,-288 1860,-288 1890,-288 1890,-288 1896,-288 1902,-294 1902,-300 1902,-300 1902,-312 1902,-312 1902,-318 1896,-324 1890,-324"/>
<text text-anchor="middle" x="1875" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">alfa_qc</text>
</g>
<!-- 50->59 -->
<g id="edge105" class="edge">
<title>50->59</title>
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<!-- 51->30 -->
<g id="edge67" class="edge">
<title>51->30</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2076.0011,-362.5542C2131.7544,-349.3059 2211.0118,-330.4724 2262.472,-318.2443"/>
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</g>
<!-- 51->32 -->
<g id="edge69" class="edge">
<title>51->32</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M2076.0749,-369.0321C2147.2046,-359.0065 2264.4549,-341.8255 2365,-324 2377.1267,-321.8501 2390.1406,-319.336 2402.3709,-316.8802"/>
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</g>
<!-- 61 -->
<g id="node62" class="node">
<title>61</title>
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<text text-anchor="middle" x="1947" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">alfa_qc</text>
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<!-- 51->61 -->
<g id="edge109" class="edge">
<title>51->61</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1994.8501,-359.8314C1987.3283,-351.3694 1978.2435,-341.1489 1970.0196,-331.8971"/>
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<!-- 52->36 -->
<g id="edge70" class="edge">
<title>52->36</title>
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<!-- 53 -->
<g id="node54" class="node">
<title>53</title>
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<text text-anchor="middle" x="597" y="-381" font-family="sans" font-size="10.00" fill="#000000">extract_transcriptome</text>
<text text-anchor="middle" x="597" y="-370" font-family="sans" font-size="10.00" fill="#000000">organism: homo_sapiens</text>
</g>
<!-- 53->37 -->
<g id="edge71" class="edge">
<title>53->37</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M551.0737,-359.8314C526.4077,-350.0734 495.8309,-337.977 469.914,-327.7242"/>
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<!-- 57 -->
<g id="node58" class="node">
<title>57</title>
<path fill="none" stroke="#59d856" stroke-width="2" d="M660.5,-324C660.5,-324 575.5,-324 575.5,-324 569.5,-324 563.5,-318 563.5,-312 563.5,-312 563.5,-300 563.5,-300 563.5,-294 569.5,-288 575.5,-288 575.5,-288 660.5,-288 660.5,-288 666.5,-288 672.5,-294 672.5,-300 672.5,-300 672.5,-312 672.5,-312 672.5,-318 666.5,-324 660.5,-324"/>
<text text-anchor="middle" x="618" y="-309" font-family="sans" font-size="10.00" fill="#000000">create_index_salmon</text>
<text text-anchor="middle" x="618" y="-298" font-family="sans" font-size="10.00" fill="#000000">kmer: 31</text>
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<!-- 53->57 -->
<g id="edge102" class="edge">
<title>53->57</title>
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<!-- 54->38 -->
<g id="edge72" class="edge">
<title>54->38</title>
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<!-- 55->39 -->
