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<!-- Title: snakemake_dag Pages: 1 -->
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<title>0</title>
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<text text-anchor="middle" x="1272.5" y="-15.5" font-family="sans" font-size="10.00">finish</text>
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<title>1</title>
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<text text-anchor="middle" x="1272.5" y="-87.5" font-family="sans" font-size="10.00">MULTIQC_report</text>
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<title>1&#45;&gt;0</title>
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<title>2</title>
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<text text-anchor="middle" x="1272.5" y="-159.5" font-family="sans" font-size="10.00">prepare_MultiQC_config</text>
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<title>2&#45;&gt;1</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1272.5,-143.7C1272.5,-135.98 1272.5,-126.71 1272.5,-118.11"/>
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<title>3</title>
<path fill="none" stroke="#d8b456" stroke-width="2" d="M1327,-252C1327,-252 1218,-252 1218,-252 1212,-252 1206,-246 1206,-240 1206,-240 1206,-228 1206,-228 1206,-222 1212,-216 1218,-216 1218,-216 1327,-216 1327,-216 1333,-216 1339,-222 1339,-228 1339,-228 1339,-240 1339,-240 1339,-246 1333,-252 1327,-252"/>
<text text-anchor="middle" x="1272.5" y="-237" font-family="sans" font-size="10.00">prepare_files_for_report</text>
<text text-anchor="middle" x="1272.5" y="-226" font-family="sans" font-size="10.00">output_dir: results</text>
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<title>3&#45;&gt;2</title>
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<title>4</title>
<path fill="none" stroke="#80d856" stroke-width="2" d="M313,-324C313,-324 12,-324 12,-324 6,-324 0,-318 0,-312 0,-312 0,-300 0,-300 0,-294 6,-288 12,-288 12,-288 313,-288 313,-288 319,-288 325,-294 325,-300 325,-300 325,-312 325,-312 325,-318 319,-324 313,-324"/>
<text text-anchor="middle" x="162.5" y="-309" font-family="sans" font-size="10.00">pe_fastqc</text>
<text text-anchor="middle" x="162.5" y="-298" font-family="sans" font-size="10.00">sample: synthetic_10_reads_paired_synthetic_10_reads_paired</text>
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<title>4&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M325.4,-288.64C328.12,-288.42 330.82,-288.21 333.5,-288 653.27,-263.09 1035.18,-245.2 1195.59,-238.23"/>
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<title>5</title>
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<text text-anchor="middle" x="511.5" y="-309" font-family="sans" font-size="10.00">fastqc</text>
<text text-anchor="middle" x="511.5" y="-298" font-family="sans" font-size="10.00">sample: synthetic_10_reads_mate_1_synthetic_10_reads_mate_1</text>
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<title>5&#45;&gt;3</title>
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<title>6</title>
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<text text-anchor="middle" x="825.5" y="-375.5" font-family="sans" font-size="10.00">pe_genome_quantification_kallisto</text>
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<title>6&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M770.68,-359.96C753.84,-351.87 737.21,-340.28 727.5,-324 719.31,-310.26 716.75,-299.85 727.5,-288 758.36,-253.99 1053.16,-241.13 1195.85,-236.86"/>
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<title>7</title>
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<text text-anchor="middle" x="1326.5" y="-375.5" font-family="sans" font-size="10.00">genome_quantification_kallisto</text>
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<g id="edge7" class="edge">
<title>7&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1411.65,-360.9C1431.18,-353.05 1449.66,-341.37 1461.5,-324 1470.51,-310.78 1471.17,-300.75 1461.5,-288 1447.55,-269.59 1395.38,-255.82 1349.38,-246.93"/>
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<title>8</title>
<path fill="none" stroke="#56d86b" stroke-width="2" d="M1513.5,-396C1513.5,-396 1443.5,-396 1443.5,-396 1437.5,-396 1431.5,-390 1431.5,-384 1431.5,-384 1431.5,-372 1431.5,-372 1431.5,-366 1437.5,-360 1443.5,-360 1443.5,-360 1513.5,-360 1513.5,-360 1519.5,-360 1525.5,-366 1525.5,-372 1525.5,-372 1525.5,-384 1525.5,-384 1525.5,-390 1519.5,-396 1513.5,-396"/>
<text text-anchor="middle" x="1478.5" y="-375.5" font-family="sans" font-size="10.00">plot_TIN_scores</text>
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<title>8&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1484.14,-359.95C1489.43,-340.43 1494.4,-308.52 1478.5,-288 1462.46,-267.31 1400.99,-253.28 1349.33,-244.88"/>
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<g id="node10" class="node">
<title>9</title>
<path fill="none" stroke="#56d85b" stroke-width="2" d="M1068.5,-324C1068.5,-324 940.5,-324 940.5,-324 934.5,-324 928.5,-318 928.5,-312 928.5,-312 928.5,-300 928.5,-300 928.5,-294 934.5,-288 940.5,-288 940.5,-288 1068.5,-288 1068.5,-288 1074.5,-288 1080.5,-294 1080.5,-300 1080.5,-300 1080.5,-312 1080.5,-312 1080.5,-318 1074.5,-324 1068.5,-324"/>
<text text-anchor="middle" x="1004.5" y="-309" font-family="sans" font-size="10.00">salmon_quantmerge_genes</text>
<text text-anchor="middle" x="1004.5" y="-298" font-family="sans" font-size="10.00">salmon_merge_on: tpm</text>
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<!-- 9&#45;&gt;3 -->
<g id="edge9" class="edge">
<title>9&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1069.72,-287.97C1108.22,-277.91 1157.12,-265.14 1197.25,-254.65"/>
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<g id="node11" class="node">
<title>10</title>
<path fill="none" stroke="#56d85b" stroke-width="2" d="M1248,-324C1248,-324 1111,-324 1111,-324 1105,-324 1099,-318 1099,-312 1099,-312 1099,-300 1099,-300 1099,-294 1105,-288 1111,-288 1111,-288 1248,-288 1248,-288 1254,-288 1260,-294 1260,-300 1260,-300 1260,-312 1260,-312 1260,-318 1254,-324 1248,-324"/>
<text text-anchor="middle" x="1179.5" y="-309" font-family="sans" font-size="10.00">salmon_quantmerge_genes</text>
<text text-anchor="middle" x="1179.5" y="-298" font-family="sans" font-size="10.00">salmon_merge_on: numreads</text>
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<g id="edge10" class="edge">
<title>10&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1202.49,-287.7C1214.31,-278.8 1228.89,-267.82 1241.68,-258.2"/>
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<g id="node12" class="node">
<title>11</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M1440.5,-324C1440.5,-324 1290.5,-324 1290.5,-324 1284.5,-324 1278.5,-318 1278.5,-312 1278.5,-312 1278.5,-300 1278.5,-300 1278.5,-294 1284.5,-288 1290.5,-288 1290.5,-288 1440.5,-288 1440.5,-288 1446.5,-288 1452.5,-294 1452.5,-300 1452.5,-300 1452.5,-312 1452.5,-312 1452.5,-318 1446.5,-324 1440.5,-324"/>
<text text-anchor="middle" x="1365.5" y="-309" font-family="sans" font-size="10.00">salmon_quantmerge_transcripts</text>
<text text-anchor="middle" x="1365.5" y="-298" font-family="sans" font-size="10.00">salmon_merge_on: tpm</text>
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<g id="edge11" class="edge">
<title>11&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1342.51,-287.7C1330.69,-278.8 1316.11,-267.82 1303.32,-258.2"/>
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<g id="node13" class="node">
<title>12</title>
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<text text-anchor="middle" x="823.5" y="-309" font-family="sans" font-size="10.00">salmon_quantmerge_transcripts</text>
<text text-anchor="middle" x="823.5" y="-298" font-family="sans" font-size="10.00">salmon_merge_on: numreads</text>
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<!-- 12&#45;&gt;3 -->
<g id="edge12" class="edge">
<title>12&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M910.6,-289.47C913.6,-288.97 916.58,-288.48 919.5,-288 1014.37,-272.48 1123.88,-256.31 1195.45,-245.97"/>
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<g id="node14" class="node">
<title>13</title>
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<text text-anchor="middle" x="1714.5" y="-591.5" font-family="sans" font-size="10.00">star_rpm</text>
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<!-- 13&#45;&gt;3 -->
<g id="edge13" class="edge">
<title>13&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1684.35,-579.62C1681.37,-578.37 1678.38,-577.15 1675.5,-576 1631.6,-558.55 1606.57,-575.58 1575.5,-540 1548.9,-509.53 1556.5,-491.45 1556.5,-451 1556.5,-451 1556.5,-451 1556.5,-377 1556.5,-284.03 1433.25,-251.93 1349.14,-240.84"/>
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<!-- 40 -->
<g id="node41" class="node">
<title>40</title>
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<text text-anchor="middle" x="1821.5" y="-525" font-family="sans" font-size="10.00">rename_star_rpm_for_alfa</text>
<text text-anchor="middle" x="1821.5" y="-514" font-family="sans" font-size="10.00">unique: Unique</text>
</g>
<!-- 13&#45;&gt;40 -->
<g id="edge69" class="edge">
<title>13&#45;&gt;40</title>
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</g>
<!-- 43 -->
<g id="node44" class="node">
<title>43</title>
<path fill="none" stroke="#d87556" stroke-width="2" d="M1718.5,-540C1718.5,-540 1596.5,-540 1596.5,-540 1590.5,-540 1584.5,-534 1584.5,-528 1584.5,-528 1584.5,-516 1584.5,-516 1584.5,-510 1590.5,-504 1596.5,-504 1596.5,-504 1718.5,-504 1718.5,-504 1724.5,-504 1730.5,-510 1730.5,-516 1730.5,-516 1730.5,-528 1730.5,-528 1730.5,-534 1724.5,-540 1718.5,-540"/>
<text text-anchor="middle" x="1657.5" y="-525" font-family="sans" font-size="10.00">rename_star_rpm_for_alfa</text>
<text text-anchor="middle" x="1657.5" y="-514" font-family="sans" font-size="10.00">unique: UniqueMultiple</text>
</g>
<!-- 13&#45;&gt;43 -->
<g id="edge72" class="edge">
<title>13&#45;&gt;43</title>
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<!-- 14 -->
<g id="node15" class="node">
<title>14</title>
<path fill="none" stroke="#8fd856" stroke-width="2" d="M2094.5,-612C2094.5,-612 2058.5,-612 2058.5,-612 2052.5,-612 2046.5,-606 2046.5,-600 2046.5,-600 2046.5,-588 2046.5,-588 2046.5,-582 2052.5,-576 2058.5,-576 2058.5,-576 2094.5,-576 2094.5,-576 2100.5,-576 2106.5,-582 2106.5,-588 2106.5,-588 2106.5,-600 2106.5,-600 2106.5,-606 2100.5,-612 2094.5,-612"/>
<text text-anchor="middle" x="2076.5" y="-591.5" font-family="sans" font-size="10.00">star_rpm</text>
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<!-- 14&#45;&gt;3 -->
<g id="edge14" class="edge">
<title>14&#45;&gt;3</title>
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<!-- 42 -->
<g id="node43" class="node">
<title>42</title>
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<text text-anchor="middle" x="2283.5" y="-525" font-family="sans" font-size="10.00">rename_star_rpm_for_alfa</text>
<text text-anchor="middle" x="2283.5" y="-514" font-family="sans" font-size="10.00">unique: Unique</text>
</g>
<!-- 14&#45;&gt;42 -->
<g id="edge71" class="edge">
<title>14&#45;&gt;42</title>
<path fill="none" stroke="grey" stroke-width="2" d="M2106.6,-582.82C2137.09,-572.51 2185.1,-556.27 2223.42,-543.32"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2224.58,-546.62 2232.93,-540.1 2222.34,-539.99 2224.58,-546.62"/>
</g>
<!-- 44 -->
<g id="node45" class="node">
<title>44</title>
<path fill="none" stroke="#d87556" stroke-width="2" d="M2046.5,-540C2046.5,-540 1924.5,-540 1924.5,-540 1918.5,-540 1912.5,-534 1912.5,-528 1912.5,-528 1912.5,-516 1912.5,-516 1912.5,-510 1918.5,-504 1924.5,-504 1924.5,-504 2046.5,-504 2046.5,-504 2052.5,-504 2058.5,-510 2058.5,-516 2058.5,-516 2058.5,-528 2058.5,-528 2058.5,-534 2052.5,-540 2046.5,-540"/>
<text text-anchor="middle" x="1985.5" y="-525" font-family="sans" font-size="10.00">rename_star_rpm_for_alfa</text>
<text text-anchor="middle" x="1985.5" y="-514" font-family="sans" font-size="10.00">unique: UniqueMultiple</text>
</g>
<!-- 14&#45;&gt;44 -->
<g id="edge73" class="edge">
<title>14&#45;&gt;44</title>
<path fill="none" stroke="grey" stroke-width="2" d="M2054.01,-575.7C2042.54,-566.88 2028.44,-556.03 2016.02,-546.47"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2017.8,-543.43 2007.74,-540.1 2013.53,-548.98 2017.8,-543.43"/>
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<!-- 15 -->
<g id="node16" class="node">
<title>15</title>
<path fill="none" stroke="#afd856" stroke-width="2" d="M1892,-324C1892,-324 1805,-324 1805,-324 1799,-324 1793,-318 1793,-312 1793,-312 1793,-300 1793,-300 1793,-294 1799,-288 1805,-288 1805,-288 1892,-288 1892,-288 1898,-288 1904,-294 1904,-300 1904,-300 1904,-312 1904,-312 1904,-318 1898,-324 1892,-324"/>
<text text-anchor="middle" x="1848.5" y="-303.5" font-family="sans" font-size="10.00">alfa_concat_results</text>
<!-- 15&#45;&gt;3 -->
<g id="edge15" class="edge">
<title>15&#45;&gt;3</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1792.75,-298.22C1689.19,-285.64 1466.99,-258.64 1349.3,-244.33"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1349.63,-240.85 1339.28,-243.12 1348.78,-247.8 1349.63,-240.85"/>
<!-- 16 -->
<g id="node17" class="node">
<title>16</title>
<path fill="none" stroke="#5682d8" stroke-width="2" d="M1032.5,-830.5C1032.5,-830.5 904.5,-830.5 904.5,-830.5 898.5,-830.5 892.5,-824.5 892.5,-818.5 892.5,-818.5 892.5,-806.5 892.5,-806.5 892.5,-800.5 898.5,-794.5 904.5,-794.5 904.5,-794.5 1032.5,-794.5 1032.5,-794.5 1038.5,-794.5 1044.5,-800.5 1044.5,-806.5 1044.5,-806.5 1044.5,-818.5 1044.5,-818.5 1044.5,-824.5 1038.5,-830.5 1032.5,-830.5"/>
<text text-anchor="middle" x="968.5" y="-810" font-family="sans" font-size="10.00">pe_remove_polya_cutadapt</text>
<!-- 16&#45;&gt;6 -->
<g id="edge16" class="edge">
<title>16&#45;&gt;6</title>
<path fill="none" stroke="grey" stroke-width="2" d="M949.62,-794.37C924.03,-769.18 881.5,-719.42 881.5,-667 881.5,-667 881.5,-667 881.5,-521 881.5,-477.91 858.9,-432.26 842.42,-404.7"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="845.33,-402.75 837.1,-396.07 839.37,-406.42 845.33,-402.75"/>
<!-- 20 -->
<g id="node21" class="node">
<title>20</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M1067.5,-396C1067.5,-396 949.5,-396 949.5,-396 943.5,-396 937.5,-390 937.5,-384 937.5,-384 937.5,-372 937.5,-372 937.5,-366 943.5,-360 949.5,-360 949.5,-360 1067.5,-360 1067.5,-360 1073.5,-360 1079.5,-366 1079.5,-372 1079.5,-372 1079.5,-384 1079.5,-384 1079.5,-390 1073.5,-396 1067.5,-396"/>
<text text-anchor="middle" x="1008.5" y="-375.5" font-family="sans" font-size="10.00">pe_quantification_salmon</text>
</g>
<!-- 16&#45;&gt;20 -->
<g id="edge40" class="edge">
<title>16&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M968.5,-794.15C968.5,-767.02 968.5,-712.91 968.5,-667 968.5,-667 968.5,-667 968.5,-521 968.5,-479.48 984.54,-433.61 996.3,-405.54"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="999.65,-406.62 1000.41,-396.05 993.23,-403.84 999.65,-406.62"/>
<!-- 22 -->
<g id="node23" class="node">
<title>22</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M1716,-756C1716,-756 1615,-756 1615,-756 1609,-756 1603,-750 1603,-744 1603,-744 1603,-732 1603,-732 1603,-726 1609,-720 1615,-720 1615,-720 1716,-720 1716,-720 1722,-720 1728,-726 1728,-732 1728,-732 1728,-744 1728,-744 1728,-750 1722,-756 1716,-756"/>
<text text-anchor="middle" x="1665.5" y="-735.5" font-family="sans" font-size="10.00">pe_map_genome_star</text>
<!-- 16&#45;&gt;22 -->
<g id="edge45" class="edge">
<title>16&#45;&gt;22</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1044.75,-803.57C1180.05,-789.5 1460.31,-760.34 1592.93,-746.55"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1593.4,-750.02 1602.99,-745.5 1592.68,-743.06 1593.4,-750.02"/>
<!-- 17 -->
<g id="node18" class="node">
<title>17</title>
<path fill="none" stroke="#56b1d8" stroke-width="2" d="M1245,-468C1245,-468 1148,-468 1148,-468 1142,-468 1136,-462 1136,-456 1136,-456 1136,-444 1136,-444 1136,-438 1142,-432 1148,-432 1148,-432 1245,-432 1245,-432 1251,-432 1257,-438 1257,-444 1257,-444 1257,-456 1257,-456 1257,-462 1251,-468 1245,-468"/>
<text text-anchor="middle" x="1196.5" y="-447.5" font-family="sans" font-size="10.00">create_index_kallisto</text>
</g>
<!-- 17&#45;&gt;6 -->
<g id="edge17" class="edge">
<title>17&#45;&gt;6</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1135.85,-434.02C1132.69,-433.32 1129.56,-432.64 1126.5,-432 1089.55,-424.27 1000.66,-408.75 929.01,-396.5"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="929.46,-393.03 919.02,-394.79 928.28,-399.93 929.46,-393.03"/>
</g>
<!-- 17&#45;&gt;7 -->
<g id="edge19" class="edge">
<title>17&#45;&gt;7</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1228.3,-431.88C1245.61,-422.55 1267.22,-410.92 1285.76,-400.94"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1287.43,-404.01 1294.58,-396.19 1284.11,-397.85 1287.43,-404.01"/>
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<!-- 18 -->
<g id="node19" class="node">
<title>18</title>
<path fill="none" stroke="#d8a456" stroke-width="2" d="M1378.5,-830.5C1378.5,-830.5 1268.5,-830.5 1268.5,-830.5 1262.5,-830.5 1256.5,-824.5 1256.5,-818.5 1256.5,-818.5 1256.5,-806.5 1256.5,-806.5 1256.5,-800.5 1262.5,-794.5 1268.5,-794.5 1268.5,-794.5 1378.5,-794.5 1378.5,-794.5 1384.5,-794.5 1390.5,-800.5 1390.5,-806.5 1390.5,-806.5 1390.5,-818.5 1390.5,-818.5 1390.5,-824.5 1384.5,-830.5 1378.5,-830.5"/>
<text text-anchor="middle" x="1323.5" y="-810" font-family="sans" font-size="10.00">remove_polya_cutadapt</text>
<!-- 18&#45;&gt;7 -->
<g id="edge18" class="edge">
<title>18&#45;&gt;7</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1323.5,-794.15C1323.5,-767.02 1323.5,-712.91 1323.5,-667 1323.5,-667 1323.5,-667 1323.5,-521 1323.5,-480.99 1324.71,-434.65 1325.59,-406.08"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1329.09,-406.15 1325.91,-396.05 1322.09,-405.93 1329.09,-406.15"/>
<!-- 21 -->
<g id="node22" class="node">
<title>21</title>
<path fill="none" stroke="#9fd856" stroke-width="2" d="M1211,-396C1211,-396 1110,-396 1110,-396 1104,-396 1098,-390 1098,-384 1098,-384 1098,-372 1098,-372 1098,-366 1104,-360 1110,-360 1110,-360 1211,-360 1211,-360 1217,-360 1223,-366 1223,-372 1223,-372 1223,-384 1223,-384 1223,-390 1217,-396 1211,-396"/>
<text text-anchor="middle" x="1160.5" y="-375.5" font-family="sans" font-size="10.00">quantification_salmon</text>
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</g>
<!-- 18&#45;&gt;21 -->
<g id="edge42" class="edge">
<title>18&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1315.81,-794.09C1304.71,-767.33 1285.5,-714.21 1285.5,-667 1285.5,-667 1285.5,-667 1285.5,-521 1285.5,-480.55 1291.26,-463.98 1266.5,-432 1256.12,-418.59 1241.44,-408.33 1226.31,-400.57"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1227.39,-397.21 1216.86,-396.05 1224.37,-403.52 1227.39,-397.21"/>
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</g>
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<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
<path fill="none" stroke="#5663d8" stroke-width="2" d="M1919,-756C1919,-756 1836,-756 1836,-756 1830,-756 1824,-750 1824,-744 1824,-744 1824,-732 1824,-732 1824,-726 1830,-720 1836,-720 1836,-720 1919,-720 1919,-720 1925,-720 1931,-726 1931,-732 1931,-732 1931,-744 1931,-744 1931,-750 1925,-756 1919,-756"/>
<text text-anchor="middle" x="1877.5" y="-735.5" font-family="sans" font-size="10.00">map_genome_star</text>
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<!-- 18&#45;&gt;24 -->
<g id="edge48" class="edge">
<title>18&#45;&gt;24</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1390.6,-802.72C1498.21,-788.64 1707.99,-761.18 1813.56,-747.37"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1814.29,-750.8 1823.75,-746.03 1813.38,-743.86 1814.29,-750.8"/>
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<!-- 19 -->
<g id="node20" class="node">
<title>19</title>
<path fill="none" stroke="#70d856" stroke-width="2" d="M1516,-540C1516,-540 1433,-540 1433,-540 1427,-540 1421,-534 1421,-528 1421,-528 1421,-516 1421,-516 1421,-510 1427,-504 1433,-504 1433,-504 1516,-504 1516,-504 1522,-504 1528,-510 1528,-516 1528,-516 1528,-528 1528,-528 1528,-534 1522,-540 1516,-540"/>
<text text-anchor="middle" x="1474.5" y="-519.5" font-family="sans" font-size="10.00">merge_TIN_scores</text>
</g>
<!-- 19&#45;&gt;8 -->
<g id="edge20" class="edge">
<title>19&#45;&gt;8</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1474.98,-503.87C1475.66,-479.67 1476.92,-435.21 1477.73,-406.39"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1481.23,-406.28 1478.02,-396.19 1474.24,-406.09 1481.23,-406.28"/>
</g>
<!-- 20&#45;&gt;9 -->
<g id="edge21" class="edge">
<title>20&#45;&gt;9</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1007.51,-359.7C1007.07,-351.98 1006.54,-342.71 1006.05,-334.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1009.54,-333.89 1005.48,-324.1 1002.55,-334.29 1009.54,-333.89"/>
</g>
<!-- 20&#45;&gt;10 -->
<g id="edge23" class="edge">
<title>20&#45;&gt;10</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1050.33,-359.88C1073.92,-350.22 1103.56,-338.09 1128.5,-327.88"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1129.88,-331.1 1137.8,-324.07 1127.22,-324.62 1129.88,-331.1"/>
</g>
<!-- 20&#45;&gt;11 -->
<g id="edge25" class="edge">
<title>20&#45;&gt;11</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1079.6,-362C1082.95,-361.32 1086.26,-360.65 1089.5,-360 1148.82,-348.08 1215.43,-335.27 1268.35,-325.23"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1269.24,-328.63 1278.41,-323.33 1267.93,-321.75 1269.24,-328.63"/>
</g>
<!-- 20&#45;&gt;12 -->
<g id="edge27" class="edge">
<title>20&#45;&gt;12</title>
<path fill="none" stroke="grey" stroke-width="2" d="M963.24,-359.88C937.5,-350.14 905.09,-337.87 877.96,-327.61"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="879.2,-324.33 868.61,-324.07 876.72,-330.88 879.2,-324.33"/>
</g>
<!-- 21&#45;&gt;9 -->
<g id="edge22" class="edge">
<title>21&#45;&gt;9</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1122.34,-359.88C1101.11,-350.35 1074.49,-338.41 1051.93,-328.28"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1053.09,-324.97 1042.54,-324.07 1050.23,-331.36 1053.09,-324.97"/>
</g>
<!-- 21&#45;&gt;10 -->
<g id="edge24" class="edge">
<title>21&#45;&gt;10</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1165.2,-359.7C1167.31,-351.9 1169.86,-342.51 1172.22,-333.83"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1175.62,-334.67 1174.86,-324.1 1168.86,-332.84 1175.62,-334.67"/>
</g>
<!-- 21&#45;&gt;11 -->
<g id="edge26" class="edge">
<title>21&#45;&gt;11</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1210.39,-359.97C1239.15,-350.14 1275.51,-337.73 1305.79,-327.39"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1307.06,-330.65 1315.39,-324.11 1304.8,-324.03 1307.06,-330.65"/>
</g>
<!-- 21&#45;&gt;12 -->
<g id="edge28" class="edge">
<title>21&#45;&gt;12</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1097.7,-362.04C1094.59,-361.34 1091.51,-360.66 1088.5,-360 1033.06,-347.91 970.86,-335.42 920.66,-325.6"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="921.27,-322.15 910.79,-323.67 919.93,-329.02 921.27,-322.15"/>
</g>
<!-- 22&#45;&gt;13 -->
<g id="edge29" class="edge">
<title>22&#45;&gt;13</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1727.75,-719.95C1745.25,-711.98 1762.28,-700.47 1772.5,-684 1780.94,-670.41 1778.95,-662.64 1772.5,-648 1767.51,-636.69 1758.79,-626.74 1749.6,-618.62"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1751.78,-615.88 1741.84,-612.23 1747.33,-621.28 1751.78,-615.88"/>
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<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
<path fill="none" stroke="#56d87b" stroke-width="2" d="M1751.5,-684C1751.5,-684 1579.5,-684 1579.5,-684 1573.5,-684 1567.5,-678 1567.5,-672 1567.5,-672 1567.5,-660 1567.5,-660 1567.5,-654 1573.5,-648 1579.5,-648 1579.5,-648 1751.5,-648 1751.5,-648 1757.5,-648 1763.5,-654 1763.5,-660 1763.5,-660 1763.5,-672 1763.5,-672 1763.5,-678 1757.5,-684 1751.5,-684"/>
<text text-anchor="middle" x="1665.5" y="-669" font-family="sans" font-size="10.00">index_genomic_alignment_samtools</text>
<text text-anchor="middle" x="1665.5" y="-658" font-family="sans" font-size="10.00">seqmode: paired_end</text>
</g>
<!-- 22&#45;&gt;23 -->
<g id="edge46" class="edge">
<title>22&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1665.5,-719.7C1665.5,-711.98 1665.5,-702.71 1665.5,-694.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1669,-694.1 1665.5,-684.1 1662,-694.1 1669,-694.1"/>
<!-- 31 -->
<g id="node32" class="node">
<title>31</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M1517,-612C1517,-612 1422,-612 1422,-612 1416,-612 1410,-606 1410,-600 1410,-600 1410,-588 1410,-588 1410,-582 1416,-576 1422,-576 1422,-576 1517,-576 1517,-576 1523,-576 1529,-582 1529,-588 1529,-588 1529,-600 1529,-600 1529,-606 1523,-612 1517,-612"/>
<text text-anchor="middle" x="1469.5" y="-591.5" font-family="sans" font-size="10.00">calculate_TIN_scores</text>
</g>
<!-- 22&#45;&gt;31 -->
<g id="edge54" class="edge">
<title>22&#45;&gt;31</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1602.85,-734.4C1527.66,-729.8 1408.21,-717.33 1380.5,-684 1370.27,-671.7 1372.59,-661.91 1380.5,-648 1387.86,-635.04 1399.79,-624.92 1412.55,-617.16"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1414.46,-620.1 1421.47,-612.15 1411.03,-613.99 1414.46,-620.1"/>
</g>
<!-- 23&#45;&gt;13 -->
<g id="edge30" class="edge">
<title>23&#45;&gt;13</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1677.61,-647.7C1683.37,-639.47 1690.36,-629.48 1696.71,-620.42"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1699.66,-622.3 1702.53,-612.1 1693.92,-618.29 1699.66,-622.3"/>
</g>
<!-- 23&#45;&gt;31 -->
<g id="edge55" class="edge">
<title>23&#45;&gt;31</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1617.8,-647.97C1590.42,-638.19 1555.84,-625.84 1526.97,-615.52"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1528,-612.18 1517.41,-612.11 1525.65,-618.77 1528,-612.18"/>
</g>
<!-- 24&#45;&gt;14 -->
<g id="edge31" class="edge">
<title>24&#45;&gt;14</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1931.01,-736.44C1973.04,-732.97 2029.75,-721.05 2062.5,-684 2077.18,-667.39 2079.9,-641.89 2079.4,-622.43"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2082.89,-622.13 2078.84,-612.34 2075.9,-622.52 2082.89,-622.13"/>
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<!-- 25 -->
<g id="node26" class="node">
<title>25</title>
<path fill="none" stroke="#56d87b" stroke-width="2" d="M2041.5,-684C2041.5,-684 1869.5,-684 1869.5,-684 1863.5,-684 1857.5,-678 1857.5,-672 1857.5,-672 1857.5,-660 1857.5,-660 1857.5,-654 1863.5,-648 1869.5,-648 1869.5,-648 2041.5,-648 2041.5,-648 2047.5,-648 2053.5,-654 2053.5,-660 2053.5,-660 2053.5,-672 2053.5,-672 2053.5,-678 2047.5,-684 2041.5,-684"/>
<text text-anchor="middle" x="1955.5" y="-669" font-family="sans" font-size="10.00">index_genomic_alignment_samtools</text>
<text text-anchor="middle" x="1955.5" y="-658" font-family="sans" font-size="10.00">seqmode: single_end</text>
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<!-- 24&#45;&gt;25 -->
<g id="edge49" class="edge">
<title>24&#45;&gt;25</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1896.78,-719.7C1906.42,-711.05 1918.23,-700.45 1928.73,-691.03"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1931.34,-693.39 1936.44,-684.1 1926.66,-688.18 1931.34,-693.39"/>
<!-- 32 -->
<g id="node33" class="node">
<title>32</title>
<path fill="none" stroke="#d8c356" stroke-width="2" d="M1654,-612C1654,-612 1559,-612 1559,-612 1553,-612 1547,-606 1547,-600 1547,-600 1547,-588 1547,-588 1547,-582 1553,-576 1559,-576 1559,-576 1654,-576 1654,-576 1660,-576 1666,-582 1666,-588 1666,-588 1666,-600 1666,-600 1666,-606 1660,-612 1654,-612"/>
<text text-anchor="middle" x="1606.5" y="-591.5" font-family="sans" font-size="10.00">calculate_TIN_scores</text>
</g>
<!-- 24&#45;&gt;32 -->
<g id="edge57" class="edge">
<title>24&#45;&gt;32</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1861.6,-719.93C1842.27,-700.09 1807.82,-667.58 1772.5,-648 1755.44,-638.54 1713.43,-625.16 1675.95,-614.21"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1676.61,-610.76 1666.03,-611.34 1674.66,-617.48 1676.61,-610.76"/>
</g>
<!-- 25&#45;&gt;14 -->
<g id="edge32" class="edge">
<title>25&#45;&gt;14</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1985.1,-647.88C2001.07,-638.64 2020.96,-627.13 2038.11,-617.21"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2039.88,-620.23 2046.79,-612.19 2036.38,-614.17 2039.88,-620.23"/>
</g>
<!-- 25&#45;&gt;32 -->
<g id="edge58" class="edge">
<title>25&#45;&gt;32</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1858.37,-647.96C1806.91,-638.61 1742.42,-626.39 1676.09,-612.07"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1676.81,-608.64 1666.29,-609.94 1675.32,-615.49 1676.81,-608.64"/>
</g>
<!-- 26 -->
<g id="node27" class="node">
<title>26</title>
<path fill="none" stroke="#56d8a9" stroke-width="2" d="M2028.5,-396C2028.5,-396 1936.5,-396 1936.5,-396 1930.5,-396 1924.5,-390 1924.5,-384 1924.5,-384 1924.5,-372 1924.5,-372 1924.5,-366 1930.5,-360 1936.5,-360 1936.5,-360 2028.5,-360 2028.5,-360 2034.5,-360 2040.5,-366 2040.5,-372 2040.5,-372 2040.5,-384 2040.5,-384 2040.5,-390 2034.5,-396 2028.5,-396"/>
<text text-anchor="middle" x="1982.5" y="-375.5" font-family="sans" font-size="10.00">alfa_qc_all_samples</text>
</g>
<!-- 26&#45;&gt;15 -->
<g id="edge33" class="edge">
<title>26&#45;&gt;15</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1949.72,-359.88C1931.87,-350.55 1909.6,-338.92 1890.5,-328.94"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1891.89,-325.72 1881.41,-324.19 1888.65,-331.92 1891.89,-325.72"/>
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<!-- 27 -->
<g id="node28" class="node">
<title>27</title>
<path fill="none" stroke="#56d8a9" stroke-width="2" d="M1894.5,-396C1894.5,-396 1802.5,-396 1802.5,-396 1796.5,-396 1790.5,-390 1790.5,-384 1790.5,-384 1790.5,-372 1790.5,-372 1790.5,-366 1796.5,-360 1802.5,-360 1802.5,-360 1894.5,-360 1894.5,-360 1900.5,-360 1906.5,-366 1906.5,-372 1906.5,-372 1906.5,-384 1906.5,-384 1906.5,-390 1900.5,-396 1894.5,-396"/>
<text text-anchor="middle" x="1848.5" y="-375.5" font-family="sans" font-size="10.00">alfa_qc_all_samples</text>
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</g>
<!-- 27&#45;&gt;15 -->
<g id="edge34" class="edge">
<title>27&#45;&gt;15</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1848.5,-359.7C1848.5,-351.98 1848.5,-342.71 1848.5,-334.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1852,-334.1 1848.5,-324.1 1845,-334.1 1852,-334.1"/>
<!-- 28 -->
<g id="node29" class="node">
<title>28</title>
<path fill="none" stroke="#d88556" stroke-width="2" d="M1119,-905C1119,-905 818,-905 818,-905 812,-905 806,-899 806,-893 806,-893 806,-881 806,-881 806,-875 812,-869 818,-869 818,-869 1119,-869 1119,-869 1125,-869 1131,-875 1131,-881 1131,-881 1131,-893 1131,-893 1131,-899 1125,-905 1119,-905"/>
<text text-anchor="middle" x="968.5" y="-890" font-family="sans" font-size="10.00">pe_remove_adapters_cutadapt</text>
<text text-anchor="middle" x="968.5" y="-879" font-family="sans" font-size="10.00">sample: synthetic_10_reads_paired_synthetic_10_reads_paired</text>
</g>
<!-- 28&#45;&gt;16 -->
<g id="edge35" class="edge">
<title>28&#45;&gt;16</title>
<path fill="none" stroke="grey" stroke-width="2" d="M968.5,-868.82C968.5,-860.42 968.5,-850.12 968.5,-840.69"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="972,-840.56 968.5,-830.56 965,-840.56 972,-840.56"/>
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</g>
<!-- 29 -->
<g id="node30" class="node">
<title>29</title>
<path fill="none" stroke="#bed856" stroke-width="2" d="M1185,-540C1185,-540 1070,-540 1070,-540 1064,-540 1058,-534 1058,-528 1058,-528 1058,-516 1058,-516 1058,-510 1064,-504 1070,-504 1070,-504 1185,-504 1185,-504 1191,-504 1197,-510 1197,-516 1197,-516 1197,-528 1197,-528 1197,-534 1191,-540 1185,-540"/>
<text text-anchor="middle" x="1127.5" y="-525" font-family="sans" font-size="10.00">extract_transcriptome</text>
<text text-anchor="middle" x="1127.5" y="-514" font-family="sans" font-size="10.00">organism: homo_sapiens</text>
</g>
<!-- 29&#45;&gt;17 -->
<g id="edge36" class="edge">
<title>29&#45;&gt;17</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1144.56,-503.7C1153,-495.14 1163.32,-484.66 1172.54,-475.3"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1175.11,-477.68 1179.64,-468.1 1170.13,-472.77 1175.11,-477.68"/>
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</g>
<!-- 33 -->
<g id="node34" class="node">
<title>33</title>
<path fill="none" stroke="#d86656" stroke-width="2" d="M1106,-468C1106,-468 1009,-468 1009,-468 1003,-468 997,-462 997,-456 997,-456 997,-444 997,-444 997,-438 1003,-432 1009,-432 1009,-432 1106,-432 1106,-432 1112,-432 1118,-438 1118,-444 1118,-444 1118,-456 1118,-456 1118,-462 1112,-468 1106,-468"/>
<text text-anchor="middle" x="1057.5" y="-453" font-family="sans" font-size="10.00">create_index_salmon</text>
<text text-anchor="middle" x="1057.5" y="-442" font-family="sans" font-size="10.00">kmer: 31</text>
</g>
<!-- 29&#45;&gt;33 -->
<g id="edge60" class="edge">
<title>29&#45;&gt;33</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1110.2,-503.7C1101.64,-495.14 1091.16,-484.66 1081.8,-475.3"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1084.15,-472.7 1074.6,-468.1 1079.2,-477.65 1084.15,-472.7"/>
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</g>
<!-- 30 -->
<g id="node31" class="node">
<title>30</title>
<path fill="none" stroke="#d89556" stroke-width="2" d="M1480,-905C1480,-905 1167,-905 1167,-905 1161,-905 1155,-899 1155,-893 1155,-893 1155,-881 1155,-881 1155,-875 1161,-869 1167,-869 1167,-869 1480,-869 1480,-869 1486,-869 1492,-875 1492,-881 1492,-881 1492,-893 1492,-893 1492,-899 1486,-905 1480,-905"/>
<text text-anchor="middle" x="1323.5" y="-890" font-family="sans" font-size="10.00">remove_adapters_cutadapt</text>
<text text-anchor="middle" x="1323.5" y="-879" font-family="sans" font-size="10.00">sample: synthetic_10_reads_mate_1_synthetic_10_reads_mate_1</text>
</g>
<!-- 30&#45;&gt;18 -->
<g id="edge37" class="edge">
<title>30&#45;&gt;18</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1323.5,-868.82C1323.5,-860.42 1323.5,-850.12 1323.5,-840.69"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1327,-840.56 1323.5,-830.56 1320,-840.56 1327,-840.56"/>
</g>
<!-- 31&#45;&gt;19 -->
<g id="edge38" class="edge">
<title>31&#45;&gt;19</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1470.74,-575.7C1471.29,-567.98 1471.95,-558.71 1472.56,-550.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1476.06,-550.33 1473.28,-540.1 1469.07,-549.83 1476.06,-550.33"/>
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</g>
<!-- 32&#45;&gt;19 -->
<g id="edge39" class="edge">
<title>32&#45;&gt;19</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1574.21,-575.88C1556.63,-566.55 1534.69,-554.92 1515.87,-544.94"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1517.39,-541.78 1506.91,-540.19 1514.11,-547.97 1517.39,-541.78"/>
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</g>
<!-- 33&#45;&gt;20 -->
<g id="edge41" class="edge">
<title>33&#45;&gt;20</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1045.39,-431.7C1039.63,-423.47 1032.64,-413.48 1026.29,-404.42"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1029.08,-402.29 1020.47,-396.1 1023.34,-406.3 1029.08,-402.29"/>
<!-- 33&#45;&gt;21 -->
<g id="edge43" class="edge">
<title>33&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1082.7,-431.88C1095.91,-422.89 1112.29,-411.76 1126.61,-402.03"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1128.9,-404.71 1135.21,-396.19 1124.97,-398.92 1128.9,-404.71"/>
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</g>
<!-- 34 -->
<g id="node35" class="node">
<title>34</title>
<path fill="none" stroke="#56d88a" stroke-width="2" d="M1935,-833C1935,-833 1820,-833 1820,-833 1814,-833 1808,-827 1808,-821 1808,-821 1808,-804 1808,-804 1808,-798 1814,-792 1820,-792 1820,-792 1935,-792 1935,-792 1941,-792 1947,-798 1947,-804 1947,-804 1947,-821 1947,-821 1947,-827 1941,-833 1935,-833"/>
<text text-anchor="middle" x="1877.5" y="-821" font-family="sans" font-size="10.00">create_index_star</text>
<text text-anchor="middle" x="1877.5" y="-810" font-family="sans" font-size="10.00">index_size: 75</text>
<text text-anchor="middle" x="1877.5" y="-799" font-family="sans" font-size="10.00">organism: homo_sapiens</text>
</g>
<!-- 34&#45;&gt;22 -->
<g id="edge44" class="edge">
<title>34&#45;&gt;22</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1820.41,-791.98C1790.86,-781.87 1754.82,-769.55 1724.94,-759.33"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1726.07,-756.01 1715.47,-756.09 1723.8,-762.64 1726.07,-756.01"/>
</g>
<!-- 34&#45;&gt;24 -->
<g id="edge47" class="edge">
<title>34&#45;&gt;24</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1877.5,-791.69C1877.5,-783.91 1877.5,-774.84 1877.5,-766.45"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1881,-766.32 1877.5,-756.32 1874,-766.32 1881,-766.32"/>
</g>
<!-- 41 -->
<g id="node42" class="node">
<title>41</title>
<path fill="none" stroke="#5692d8" stroke-width="2" d="M2180.5,-540C2180.5,-540 2088.5,-540 2088.5,-540 2082.5,-540 2076.5,-534 2076.5,-528 2076.5,-528 2076.5,-516 2076.5,-516 2076.5,-510 2082.5,-504 2088.5,-504 2088.5,-504 2180.5,-504 2180.5,-504 2186.5,-504 2192.5,-510 2192.5,-516 2192.5,-516 2192.5,-528 2192.5,-528 2192.5,-534 2186.5,-540 2180.5,-540"/>
<text text-anchor="middle" x="2134.5" y="-519.5" font-family="sans" font-size="10.00">generate_alfa_index</text>
</g>
<!-- 34&#45;&gt;41 -->
<g id="edge70" class="edge">
<title>34&#45;&gt;41</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1925.31,-791.96C1971.15,-771.14 2039.67,-734.23 2083.5,-684 2116.9,-645.72 2128.45,-585.52 2132.43,-550.59"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2135.95,-550.5 2133.47,-540.2 2128.99,-549.8 2135.95,-550.5"/>
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</g>
<!-- 35 -->
<g id="node36" class="node">
<title>35</title>
<path fill="none" stroke="#56a2d8" stroke-width="2" d="M1966.5,-468C1966.5,-468 1936.5,-468 1936.5,-468 1930.5,-468 1924.5,-462 1924.5,-456 1924.5,-456 1924.5,-444 1924.5,-444 1924.5,-438 1930.5,-432 1936.5,-432 1936.5,-432 1966.5,-432 1966.5,-432 1972.5,-432 1978.5,-438 1978.5,-444 1978.5,-444 1978.5,-456 1978.5,-456 1978.5,-462 1972.5,-468 1966.5,-468"/>
<text text-anchor="middle" x="1951.5" y="-447.5" font-family="sans" font-size="10.00">alfa_qc</text>
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</g>
<!-- 35&#45;&gt;26 -->
<g id="edge50" class="edge">
<title>35&#45;&gt;26</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1959.16,-431.7C1962.69,-423.73 1966.96,-414.1 1970.87,-405.26"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1974.08,-406.67 1974.93,-396.1 1967.68,-403.83 1974.08,-406.67"/>
<!-- 36 -->
<g id="node37" class="node">
<title>36</title>
<path fill="none" stroke="#56a2d8" stroke-width="2" d="M2149.5,-468C2149.5,-468 2119.5,-468 2119.5,-468 2113.5,-468 2107.5,-462 2107.5,-456 2107.5,-456 2107.5,-444 2107.5,-444 2107.5,-438 2113.5,-432 2119.5,-432 2119.5,-432 2149.5,-432 2149.5,-432 2155.5,-432 2161.5,-438 2161.5,-444 2161.5,-444 2161.5,-456 2161.5,-456 2161.5,-462 2155.5,-468 2149.5,-468"/>
<text text-anchor="middle" x="2134.5" y="-447.5" font-family="sans" font-size="10.00">alfa_qc</text>
<!-- 36&#45;&gt;26 -->
<g id="edge51" class="edge">
<title>36&#45;&gt;26</title>
<path fill="none" stroke="grey" stroke-width="2" d="M2107.33,-436.49C2085.5,-426.43 2054.35,-412.09 2028.64,-400.25"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2029.98,-397.01 2019.43,-396.01 2027.05,-403.37 2029.98,-397.01"/>
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</g>
<!-- 37 -->
<g id="node38" class="node">
<title>37</title>
<path fill="none" stroke="#56a2d8" stroke-width="2" d="M1863.5,-468C1863.5,-468 1833.5,-468 1833.5,-468 1827.5,-468 1821.5,-462 1821.5,-456 1821.5,-456 1821.5,-444 1821.5,-444 1821.5,-438 1827.5,-432 1833.5,-432 1833.5,-432 1863.5,-432 1863.5,-432 1869.5,-432 1875.5,-438 1875.5,-444 1875.5,-444 1875.5,-456 1875.5,-456 1875.5,-462 1869.5,-468 1863.5,-468"/>
<text text-anchor="middle" x="1848.5" y="-447.5" font-family="sans" font-size="10.00">alfa_qc</text>
</g>
<!-- 37&#45;&gt;27 -->
<g id="edge52" class="edge">
<title>37&#45;&gt;27</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1848.5,-431.7C1848.5,-423.98 1848.5,-414.71 1848.5,-406.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1852,-406.1 1848.5,-396.1 1845,-406.1 1852,-406.1"/>
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</g>
<!-- 38 -->
<g id="node39" class="node">
<title>38</title>
<path fill="none" stroke="#56a2d8" stroke-width="2" d="M2038.5,-468C2038.5,-468 2008.5,-468 2008.5,-468 2002.5,-468 1996.5,-462 1996.5,-456 1996.5,-456 1996.5,-444 1996.5,-444 1996.5,-438 2002.5,-432 2008.5,-432 2008.5,-432 2038.5,-432 2038.5,-432 2044.5,-432 2050.5,-438 2050.5,-444 2050.5,-444 2050.5,-456 2050.5,-456 2050.5,-462 2044.5,-468 2038.5,-468"/>
<text text-anchor="middle" x="2023.5" y="-447.5" font-family="sans" font-size="10.00">alfa_qc</text>
</g>
<!-- 38&#45;&gt;27 -->
<g id="edge53" class="edge">
<title>38&#45;&gt;27</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1996.47,-435.96C1993.46,-434.59 1990.43,-433.25 1987.5,-432 1960.74,-420.6 1930.63,-408.97 1905.29,-399.53"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1906.42,-396.21 1895.83,-396.02 1903.99,-402.78 1906.42,-396.21"/>
</g>
<!-- 39 -->
<g id="node40" class="node">
<title>39</title>
<path fill="none" stroke="#56d89a" stroke-width="2" d="M1537.5,-684C1537.5,-684 1401.5,-684 1401.5,-684 1395.5,-684 1389.5,-678 1389.5,-672 1389.5,-672 1389.5,-660 1389.5,-660 1389.5,-654 1395.5,-648 1401.5,-648 1401.5,-648 1537.5,-648 1537.5,-648 1543.5,-648 1549.5,-654 1549.5,-660 1549.5,-660 1549.5,-672 1549.5,-672 1549.5,-678 1543.5,-684 1537.5,-684"/>
<text text-anchor="middle" x="1469.5" y="-663.5" font-family="sans" font-size="10.00">extract_transcripts_as_bed12</text>
</g>
<!-- 39&#45;&gt;31 -->
<g id="edge56" class="edge">
<title>39&#45;&gt;31</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1469.5,-647.7C1469.5,-639.98 1469.5,-630.71 1469.5,-622.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1473,-622.1 1469.5,-612.1 1466,-622.1 1473,-622.1"/>
</g>
<!-- 39&#45;&gt;32 -->
<g id="edge59" class="edge">
<title>39&#45;&gt;32</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1503.01,-647.88C1521.34,-638.51 1544.24,-626.81 1563.83,-616.8"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1565.54,-619.86 1572.86,-612.19 1562.36,-613.62 1565.54,-619.86"/>
</g>
<!-- 40&#45;&gt;35 -->
<g id="edge61" class="edge">
<title>40&#45;&gt;35</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1853.3,-503.88C1872.12,-493.74 1896.01,-480.88 1915.52,-470.37"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1917.27,-473.4 1924.42,-465.58 1913.96,-467.24 1917.27,-473.4"/>
</g>
<!-- 41&#45;&gt;35 -->
<g id="edge62" class="edge">
<title>41&#45;&gt;35</title>
<path fill="none" stroke="grey" stroke-width="2" d="M2083.36,-503.9C2057.11,-494.82 2024.51,-483.07 1987.9,-467.99"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1989.08,-464.7 1978.5,-464.09 1986.39,-471.16 1989.08,-464.7"/>
</g>
<!-- 41&#45;&gt;36 -->
<g id="edge64" class="edge">
<title>41&#45;&gt;36</title>
<path fill="none" stroke="grey" stroke-width="2" d="M2134.5,-503.7C2134.5,-495.98 2134.5,-486.71 2134.5,-478.11"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2138,-478.1 2134.5,-468.1 2131,-478.1 2138,-478.1"/>
</g>
<!-- 41&#45;&gt;37 -->
<g id="edge66" class="edge">
<title>41&#45;&gt;37</title>
<path fill="none" stroke="grey" stroke-width="2" d="M2076.41,-506.2C2073.4,-505.45 2070.41,-504.71 2067.5,-504 2000.07,-487.46 1982.93,-484.54 1915.5,-468 1905.73,-465.6 1895.16,-462.95 1885.38,-460.47"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1886.09,-457.04 1875.53,-457.96 1884.36,-463.82 1886.09,-457.04"/>
</g>
<!-- 41&#45;&gt;38 -->
<g id="edge68" class="edge">
<title>41&#45;&gt;38</title>
<path fill="none" stroke="grey" stroke-width="2" d="M2107.35,-503.88C2092.97,-494.81 2075.12,-483.55 2059.59,-473.76"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2061.08,-470.56 2050.76,-468.19 2057.35,-476.48 2061.08,-470.56"/>
</g>
<!-- 42&#45;&gt;36 -->
<g id="edge63" class="edge">
<title>42&#45;&gt;36</title>
<path fill="none" stroke="grey" stroke-width="2" d="M2247.05,-503.88C2223.88,-492.99 2194,-478.95 2170.85,-468.07"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2172.23,-464.86 2161.69,-463.78 2169.26,-471.2 2172.23,-464.86"/>
</g>
<!-- 43&#45;&gt;37 -->
<g id="edge65" class="edge">
<title>43&#45;&gt;37</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1704.22,-503.88C1737.41,-491.71 1781.34,-475.62 1811.97,-464.39"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1813.23,-467.65 1821.41,-460.93 1810.82,-461.08 1813.23,-467.65"/>
</g>
<!-- 44&#45;&gt;38 -->
<g id="edge67" class="edge">
<title>44&#45;&gt;38</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1994.89,-503.7C1999.26,-495.64 2004.56,-485.89 2009.4,-476.98"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="2012.52,-478.56 2014.21,-468.1 2006.37,-475.22 2012.52,-478.56"/>
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</g>
</g>
</svg>