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<!-- 3&#45;&gt;0 -->
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<!-- 8 -->
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<text text-anchor="middle" x="565" y="-87.5" font-family="sans" font-size="10.00" fill="#000000">salmon_quantmerge_genes</text>
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<!-- 3&#45;&gt;8 -->
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<!-- 9 -->
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<text text-anchor="middle" x="401" y="-87.5" font-family="sans" font-size="10.00" fill="#000000">salmon_quantmerge_transcripts</text>
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<!-- 3&#45;&gt;9 -->
<g id="edge25" class="edge">
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<!-- 4 -->
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<!-- 4&#45;&gt;0 -->
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<!-- 4&#45;&gt;8 -->
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<!-- 4&#45;&gt;9 -->
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<!-- 5&#45;&gt;0 -->
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<!-- 6&#45;&gt;0 -->
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<!-- 7 -->
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<!-- 7&#45;&gt;0 -->
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<!-- 8&#45;&gt;0 -->
<g id="edge1" class="edge">
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<!-- 9&#45;&gt;0 -->
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<!-- 10&#45;&gt;0 -->
<g id="edge11" class="edge">
<title>10&#45;&gt;0</title>
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<!-- 11 -->
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<text text-anchor="middle" x="743" y="-87.5" font-family="sans" font-size="10.00" fill="#000000">star_rpm_single_end</text>
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</g>
<!-- 11&#45;&gt;0 -->
<g id="edge6" class="edge">
<title>11&#45;&gt;0</title>
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<!-- 12 -->
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<text text-anchor="middle" x="546" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">pe_remove_polya_cutadapt</text>
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</g>
<title>12&#45;&gt;3</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M545.8733,-287.7623C545.7028,-263.201 545.3976,-219.2474 545.1969,-190.3541"/>
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</g>
<title>12&#45;&gt;5</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M489.0978,-287.9875C461.3893,-278.493 427.8994,-265.9316 399,-252 358.6163,-232.5322 315.0772,-205.2176 285.7526,-185.797"/>
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<!-- 19 -->
<g id="node20" class="node">
<title>19</title>
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<text text-anchor="middle" x="995" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">pe_map_genome_star</text>
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<!-- 12&#45;&gt;19 -->
<g id="edge37" class="edge">
<title>12&#45;&gt;19</title>
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<!-- 13 -->
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<!-- 13&#45;&gt;3 -->
<g id="edge12" class="edge">
<title>13&#45;&gt;3</title>
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<!-- 13&#45;&gt;4 -->
<g id="edge15" class="edge">
<title>13&#45;&gt;4</title>
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<!-- 14 -->
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<!-- 14&#45;&gt;4 -->
<g id="edge14" class="edge">
<title>14&#45;&gt;4</title>
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<!-- 14&#45;&gt;6 -->
<title>14&#45;&gt;6</title>
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<!-- 20 -->
<g id="node21" class="node">
<title>20</title>
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<!-- 14&#45;&gt;20 -->
<g id="edge39" class="edge">
<title>14&#45;&gt;20</title>
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<!-- 15 -->
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<!-- 15&#45;&gt;5 -->
<g id="edge16" class="edge">
<title>15&#45;&gt;5</title>
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<!-- 15&#45;&gt;6 -->
<g id="edge18" class="edge">
<title>15&#45;&gt;6</title>
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<text text-anchor="middle" x="1116" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">pe_index_genomic_alignment_samtools</text>
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<!-- 16&#45;&gt;7 -->
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<!-- 16&#45;&gt;10 -->
<g id="edge28" class="edge">
<title>16&#45;&gt;10</title>
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<!-- 17 -->
<path fill="none" stroke="#56d0d8" stroke-width="2" d="M990.5,-180C990.5,-180 869.5,-180 869.5,-180 863.5,-180 857.5,-174 857.5,-168 857.5,-168 857.5,-156 857.5,-156 857.5,-150 863.5,-144 869.5,-144 869.5,-144 990.5,-144 990.5,-144 996.5,-144 1002.5,-150 1002.5,-156 1002.5,-156 1002.5,-168 1002.5,-168 1002.5,-174 996.5,-180 990.5,-180"/>
<text text-anchor="middle" x="930" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">extract_transcripts_as_bed12</text>
<!-- 17&#45;&gt;7 -->
<g id="edge22" class="edge">
<title>17&#45;&gt;7</title>
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<!-- 18 -->
<path fill="none" stroke="#9fd856" stroke-width="2" d="M827,-180C827,-180 677,-180 677,-180 671,-180 665,-174 665,-168 665,-168 665,-156 665,-156 665,-150 671,-144 677,-144 677,-144 827,-144 827,-144 833,-144 839,-150 839,-156 839,-156 839,-168 839,-168 839,-174 833,-180 827,-180"/>
<text text-anchor="middle" x="752" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">index_genomic_alignment_samtools</text>
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<!-- 18&#45;&gt;7 -->
<g id="edge20" class="edge">
<title>18&#45;&gt;7</title>
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<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M749.7289,-143.8314C748.7664,-136.131 747.6218,-126.9743 746.5521,-118.4166"/>
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</g>
<title>19&#45;&gt;10</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M1051.7598,-228.313C1111.4117,-221.0258 1199.419,-206.1048 1220,-180 1229.906,-167.4353 1228.3076,-157.6742 1220,-144 1210.64,-128.5934 1195.2997,-117.3827 1179.2404,-109.3089"/>
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<!-- 19&#45;&gt;16 -->
<g id="edge35" class="edge">
<title>19&#45;&gt;16</title>
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<title>20&#45;&gt;11</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M676.7008,-215.8753C661.1777,-197.3079 642.7255,-167.863 656,-144 663.0918,-131.2514 674.5767,-121.1272 686.9096,-113.255"/>
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<!-- 20&#45;&gt;18 -->
<g id="edge36" class="edge">
<title>20&#45;&gt;18</title>
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<!-- 21 -->
<g id="node22" class="node">
<title>21</title>
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<text text-anchor="middle" x="546" y="-375.5" font-family="sans" font-size="10.00" fill="#000000">pe_remove_adapters_cutadapt</text>
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<!-- 21&#45;&gt;12 -->
<g id="edge31" class="edge">
<title>21&#45;&gt;12</title>
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<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="549.5001,-334.4132 546,-324.4133 542.5001,-334.4133 549.5001,-334.4132"/>
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<text text-anchor="middle" x="249" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">extract_transcriptome</text>
<title>22&#45;&gt;13</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M302.725,-287.9243C332.1073,-278.0387 368.6852,-265.7321 399.4758,-255.3726"/>
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<!-- 22&#45;&gt;15 -->
<g id="edge34" class="edge">
<title>22&#45;&gt;15</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M249,-287.8314C249,-280.131 249,-270.9743 249,-262.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="252.5001,-262.4132 249,-252.4133 245.5001,-262.4133 252.5001,-262.4132"/>
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<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
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<text text-anchor="middle" x="383" y="-375.5" font-family="sans" font-size="10.00" fill="#000000">remove_adapters_cutadapt</text>
<title>23&#45;&gt;14</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M383,-359.8314C383,-352.131 383,-342.9743 383,-334.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="386.5001,-334.4132 383,-324.4133 379.5001,-334.4133 386.5001,-334.4132"/>
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<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
<path fill="none" stroke="#56d88a" stroke-width="2" d="M844,-324C844,-324 774,-324 774,-324 768,-324 762,-318 762,-312 762,-312 762,-300 762,-300 762,-294 768,-288 774,-288 774,-288 844,-288 844,-288 850,-288 856,-294 856,-300 856,-300 856,-312 856,-312 856,-318 850,-324 844,-324"/>
<text text-anchor="middle" x="809" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">create_index_star</text>
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<!-- 24&#45;&gt;19 -->
<g id="edge38" class="edge">
<title>24&#45;&gt;19</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M855.9357,-287.8314C881.1437,-278.0734 912.3926,-265.977 938.8791,-255.7242"/>
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<!-- 24&#45;&gt;20 -->
<g id="edge40" class="edge">
<title>24&#45;&gt;20</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M779.9806,-287.8314C765.2714,-278.6221 747.2356,-267.3301 731.4878,-257.4706"/>
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