rule_graph.svg

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<!-- Title: snakemake_dag Pages: 1 -->
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<!-- 1 -->
<g id="node2" class="node">
<title>1</title>
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<!-- 1&#45;&gt;0 -->
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<title>1&#45;&gt;0</title>
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<!-- 2 -->
<g id="node3" class="node">
<title>2</title>
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<!-- 2&#45;&gt;0 -->
<g id="edge2" class="edge">
<title>2&#45;&gt;0</title>
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<!-- 3 -->
<g id="node4" class="node">
<title>3</title>
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<text text-anchor="middle" x="1114" y="-447.5" font-family="sans" font-size="10.00" fill="#000000">fastqc</text>
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<!-- 3&#45;&gt;1 -->
<g id="edge5" class="edge">
<title>3&#45;&gt;1</title>
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<!-- 4 -->
<g id="node5" class="node">
<title>4</title>
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<text text-anchor="middle" x="251" y="-591.5" font-family="sans" font-size="10.00" fill="#000000">pe_genome_quantification_kallisto</text>
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<!-- 4&#45;&gt;1 -->
<g id="edge9" class="edge">
<title>4&#45;&gt;1</title>
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<!-- 5 -->
<g id="node6" class="node">
<title>5</title>
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<!-- 5&#45;&gt;1 -->
<g id="edge8" class="edge">
<title>5&#45;&gt;1</title>
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<!-- 6 -->
<g id="node7" class="node">
<title>6</title>
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<!-- 6&#45;&gt;1 -->
<g id="edge4" class="edge">
<title>6&#45;&gt;1</title>
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<!-- 7 -->
<g id="node8" class="node">
<title>7</title>
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<text text-anchor="middle" x="244" y="-519.5" font-family="sans" font-size="10.00" fill="#000000">salmon_quantmerge_genes</text>
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<!-- 7&#45;&gt;1 -->
<g id="edge6" class="edge">
<title>7&#45;&gt;1</title>
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<!-- 8 -->
<g id="node9" class="node">
<title>8</title>
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<text text-anchor="middle" x="408" y="-519.5" font-family="sans" font-size="10.00" fill="#000000">salmon_quantmerge_transcripts</text>
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<!-- 8&#45;&gt;1 -->
<g id="edge3" class="edge">
<title>8&#45;&gt;1</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M409.2432,-503.8247C411.0006,-476.5213 414,-423.2893 414,-378 414,-378 414,-378 414,-234 414,-187.5145 446.8683,-142.51 471.2376,-115.5311"/>
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<!-- 9 -->
<g id="node10" class="node">
<title>9</title>
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<!-- 9&#45;&gt;1 -->
<g id="edge11" class="edge">
<title>9&#45;&gt;1</title>
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<!-- 25 -->
<g id="node26" class="node">
<title>25</title>
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<text text-anchor="middle" x="966" y="-375.5" font-family="sans" font-size="10.00" fill="#000000">rename_star_rpm_for_alfa</text>
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<!-- 9&#45;&gt;25 -->
<g id="edge44" class="edge">
<title>9&#45;&gt;25</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M892.7295,-431.8314C904.9162,-422.8779 919.7823,-411.9558 932.9312,-402.2955"/>
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<!-- 10 -->
<g id="node11" class="node">
<title>10</title>
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<text text-anchor="middle" x="537" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">alfa_concat_results</text>
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<!-- 10&#45;&gt;1 -->
<g id="edge10" class="edge">
<title>10&#45;&gt;1</title>
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<!-- 11 -->
<g id="node12" class="node">
<title>11</title>
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<text text-anchor="middle" x="664" y="-159.5" font-family="sans" font-size="10.00" fill="#000000">prepare_multiqc_config</text>
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<!-- 11&#45;&gt;1 -->
<g id="edge7" class="edge">
<title>11&#45;&gt;1</title>
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<!-- 12 -->
<g id="node13" class="node">
<title>12</title>
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<!-- 12&#45;&gt;2 -->
<g id="edge13" class="edge">
<title>12&#45;&gt;2</title>
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<!-- 13 -->
<g id="node14" class="node">
<title>13</title>
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<!-- 13&#45;&gt;2 -->
<g id="edge12" class="edge">
<title>13&#45;&gt;2</title>
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<!-- 21 -->
<g id="node22" class="node">
<title>21</title>
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<text text-anchor="middle" x="872" y="-591.5" font-family="sans" font-size="10.00" fill="#000000">pe_map_genome_star</text>
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<!-- 13&#45;&gt;21 -->
<g id="edge37" class="edge">
<title>13&#45;&gt;21</title>
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<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
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<!-- 13&#45;&gt;23 -->
<g id="edge41" class="edge">
<title>13&#45;&gt;23</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M900.8398,-648.937C872.734,-638.7681 836.8393,-625.781 807.0069,-614.9874"/>
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<!-- 33 -->
<g id="node34" class="node">
<title>33</title>
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<!-- 13&#45;&gt;33 -->
<g id="edge54" class="edge">
<title>13&#45;&gt;33</title>
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<!-- 14 -->
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<title>14</title>
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<!-- 14&#45;&gt;3 -->
<g id="edge14" class="edge">
<title>14&#45;&gt;3</title>
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<!-- 26 -->
<g id="node27" class="node">
<title>26</title>
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<!-- 14&#45;&gt;26 -->
<g id="edge45" class="edge">
<title>14&#45;&gt;26</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M670,-791.8314C670,-784.131 670,-774.9743 670,-766.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="673.5001,-766.4132 670,-756.4133 666.5001,-766.4133 673.5001,-766.4132"/>
</g>
<!-- 28 -->
<g id="node29" class="node">
<title>28</title>
<path fill="none" stroke="#59d856" stroke-width="2" d="M536,-756C536,-756 426,-756 426,-756 420,-756 414,-750 414,-744 414,-744 414,-732 414,-732 414,-726 420,-720 426,-720 426,-720 536,-720 536,-720 542,-720 548,-726 548,-732 548,-732 548,-744 548,-744 548,-750 542,-756 536,-756"/>
<text text-anchor="middle" x="481" y="-735.5" font-family="sans" font-size="10.00" fill="#000000">remove_adapters_cutadapt</text>
</g>
<!-- 14&#45;&gt;28 -->
<g id="edge46" class="edge">
<title>14&#45;&gt;28</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M642.9209,-799.6842C615.6776,-789.3058 572.8354,-772.9849 538.0613,-759.7376"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="539.0777,-756.3795 528.4868,-756.0902 536.5857,-762.9209 539.0777,-756.3795"/>
</g>
<!-- 15 -->
<g id="node16" class="node">
<title>15</title>
<path fill="none" stroke="#d87556" stroke-width="2" d="M726,-684C726,-684 614,-684 614,-684 608,-684 602,-678 602,-672 602,-672 602,-660 602,-660 602,-654 608,-648 614,-648 614,-648 726,-648 726,-648 732,-648 738,-654 738,-660 738,-660 738,-672 738,-672 738,-678 732,-684 726,-684"/>
<text text-anchor="middle" x="670" y="-663.5" font-family="sans" font-size="10.00" fill="#000000">pe_remove_polya_cutadapt</text>
</g>
<!-- 15&#45;&gt;4 -->
<g id="edge15" class="edge">
<title>15&#45;&gt;4</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M601.5835,-649.8725C598.3486,-649.2167 595.1418,-648.5886 592,-648 485.2072,-627.9937 454.9352,-630.5714 344.1102,-612.1387"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="344.6531,-608.681 334.2108,-610.4724 343.4911,-615.5839 344.6531,-608.681"/>
</g>
<!-- 19 -->
<g id="node20" class="node">
<title>19</title>
<path fill="none" stroke="#5673d8" stroke-width="2" d="M596.5,-612C596.5,-612 493.5,-612 493.5,-612 487.5,-612 481.5,-606 481.5,-600 481.5,-600 481.5,-588 481.5,-588 481.5,-582 487.5,-576 493.5,-576 493.5,-576 596.5,-576 596.5,-576 602.5,-576 608.5,-582 608.5,-588 608.5,-588 608.5,-600 608.5,-600 608.5,-606 602.5,-612 596.5,-612"/>
<text text-anchor="middle" x="545" y="-591.5" font-family="sans" font-size="10.00" fill="#000000">pe_quantification_salmon</text>
</g>
<!-- 15&#45;&gt;19 -->
<g id="edge33" class="edge">
<title>15&#45;&gt;19</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M638.4572,-647.8314C622.3209,-638.5368 602.5014,-627.1208 585.2728,-617.1971"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="586.945,-614.1212 576.5327,-612.1628 583.4511,-620.187 586.945,-614.1212"/>
</g>
<!-- 15&#45;&gt;21 -->
<g id="edge38" class="edge">
<title>15&#45;&gt;21</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M720.7124,-647.9243C748.327,-638.0815 782.675,-625.8386 811.6601,-615.5073"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="813.0223,-618.7375 821.2667,-612.0831 810.6721,-612.1438 813.0223,-618.7375"/>
</g>
<!-- 16 -->
<g id="node17" class="node">
<title>16</title>
<path fill="none" stroke="#d8b456" stroke-width="2" d="M293,-684C293,-684 209,-684 209,-684 203,-684 197,-678 197,-672 197,-672 197,-660 197,-660 197,-654 203,-648 209,-648 209,-648 293,-648 293,-648 299,-648 305,-654 305,-660 305,-660 305,-672 305,-672 305,-678 299,-684 293,-684"/>
<text text-anchor="middle" x="251" y="-663.5" font-family="sans" font-size="10.00" fill="#000000">create_index_kallisto</text>
</g>
<!-- 16&#45;&gt;4 -->
<g id="edge16" class="edge">
<title>16&#45;&gt;4</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M251,-647.8314C251,-640.131 251,-630.9743 251,-622.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="254.5001,-622.4132 251,-612.4133 247.5001,-622.4133 254.5001,-622.4132"/>
</g>
<!-- 16&#45;&gt;5 -->
<g id="edge18" class="edge">
<title>16&#45;&gt;5</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M206.5878,-647.8314C182.8396,-638.1162 153.4254,-626.0831 128.4336,-615.8592"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="129.6736,-612.585 119.0929,-612.038 127.0231,-619.0638 129.6736,-612.585"/>
</g>
<!-- 17 -->
<g id="node18" class="node">
<title>17</title>
<path fill="none" stroke="#56a2d8" stroke-width="2" d="M444,-684C444,-684 348,-684 348,-684 342,-684 336,-678 336,-672 336,-672 336,-660 336,-660 336,-654 342,-648 348,-648 348,-648 444,-648 444,-648 450,-648 456,-654 456,-660 456,-660 456,-672 456,-672 456,-678 450,-684 444,-684"/>
<text text-anchor="middle" x="396" y="-663.5" font-family="sans" font-size="10.00" fill="#000000">remove_polya_cutadapt</text>
</g>
<!-- 17&#45;&gt;5 -->
<g id="edge17" class="edge">
<title>17&#45;&gt;5</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M335.9989,-652.5418C286.4409,-641.426 215.4925,-625.5123 160.0734,-613.0819"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="160.7906,-609.6559 150.267,-610.8823 159.2585,-616.4861 160.7906,-609.6559"/>
</g>
<!-- 20 -->
<g id="node21" class="node">
<title>20</title>
<path fill="none" stroke="#9fd856" stroke-width="2" d="M451.5,-612C451.5,-612 364.5,-612 364.5,-612 358.5,-612 352.5,-606 352.5,-600 352.5,-600 352.5,-588 352.5,-588 352.5,-582 358.5,-576 364.5,-576 364.5,-576 451.5,-576 451.5,-576 457.5,-576 463.5,-582 463.5,-588 463.5,-588 463.5,-600 463.5,-600 463.5,-606 457.5,-612 451.5,-612"/>
<text text-anchor="middle" x="408" y="-591.5" font-family="sans" font-size="10.00" fill="#000000">quantification_salmon</text>
</g>
<!-- 17&#45;&gt;20 -->
<g id="edge35" class="edge">
<title>17&#45;&gt;20</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M399.0281,-647.8314C400.3115,-640.131 401.8376,-630.9743 403.2639,-622.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="406.7394,-622.8526 404.9311,-612.4133 399.8347,-621.7018 406.7394,-622.8526"/>
</g>
<!-- 17&#45;&gt;23 -->
<g id="edge42" class="edge">
<title>17&#45;&gt;23</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M456.1526,-650.0535C459.1398,-649.3415 462.1014,-648.6529 465,-648 542.4822,-630.5481 632.6938,-614.0378 690.2899,-603.9737"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="691.0497,-607.3942 700.3017,-602.2319 689.8498,-600.4978 691.0497,-607.3942"/>
</g>
<!-- 18 -->
<g id="node19" class="node">
<title>18</title>
<path fill="none" stroke="#97d856" stroke-width="2" d="M652,-396C652,-396 576,-396 576,-396 570,-396 564,-390 564,-384 564,-384 564,-372 564,-372 564,-366 570,-360 576,-360 576,-360 652,-360 652,-360 658,-360 664,-366 664,-372 664,-372 664,-384 664,-384 664,-390 658,-396 652,-396"/>
<text text-anchor="middle" x="614" y="-375.5" font-family="sans" font-size="10.00" fill="#000000">merge_TIN_scores</text>
</g>
<!-- 18&#45;&gt;6 -->
<g id="edge19" class="edge">
<title>18&#45;&gt;6</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M600.7017,-359.7623C582.3979,-334.66 549.3242,-289.3017 528.2989,-260.4671"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="530.9101,-258.1076 522.1903,-252.0896 525.2541,-262.2318 530.9101,-258.1076"/>
</g>
<!-- 19&#45;&gt;7 -->
<g id="edge20" class="edge">
<title>19&#45;&gt;7</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M481.3072,-578.2584C478.1608,-577.4922 475.0451,-576.736 472,-576 422.0988,-563.9387 365.9864,-550.6455 321.9148,-540.2664"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="322.6658,-536.8476 312.1299,-537.9633 321.062,-543.6614 322.6658,-536.8476"/>
</g>
<!-- 19&#45;&gt;8 -->
<g id="edge22" class="edge">
<title>19&#45;&gt;8</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M510.4291,-575.8314C492.5815,-566.4516 470.6226,-554.9112 451.62,-544.9244"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="453.0401,-541.7168 442.5598,-540.1628 449.7836,-547.9132 453.0401,-541.7168"/>
</g>
<!-- 20&#45;&gt;7 -->
<g id="edge21" class="edge">
<title>20&#45;&gt;7</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M366.6159,-575.8314C344.6818,-566.2018 317.5608,-554.295 294.4069,-544.1299"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="295.65,-540.8532 285.0865,-540.038 292.836,-547.2627 295.65,-540.8532"/>
</g>
<!-- 20&#45;&gt;8 -->
<g id="edge23" class="edge">
<title>20&#45;&gt;8</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M408,-575.8314C408,-568.131 408,-558.9743 408,-550.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="411.5001,-550.4132 408,-540.4133 404.5001,-550.4133 411.5001,-550.4132"/>
</g>
<!-- 21&#45;&gt;9 -->
<g id="edge25" class="edge">
<title>21&#45;&gt;9</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M923.0855,-575.9348C939.0666,-567.5922 954.8895,-555.9115 964,-540 971.9502,-526.115 972.0775,-517.8114 964,-504 951.3587,-482.3853 926.5324,-468.7542 905.2939,-460.5947"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="906.4394,-457.2873 895.8448,-457.2217 904.086,-463.8799 906.4394,-457.2873"/>
</g>
<!-- 22 -->
<g id="node23" class="node">
<title>22</title>
<path fill="none" stroke="#56b1d8" stroke-width="2" d="M943,-540C943,-540 793,-540 793,-540 787,-540 781,-534 781,-528 781,-528 781,-516 781,-516 781,-510 787,-504 793,-504 793,-504 943,-504 943,-504 949,-504 955,-510 955,-516 955,-516 955,-528 955,-528 955,-534 949,-540 943,-540"/>
<text text-anchor="middle" x="868" y="-519.5" font-family="sans" font-size="10.00" fill="#000000">index_genomic_alignment_samtools</text>
</g>
<!-- 21&#45;&gt;22 -->
<g id="edge39" class="edge">
<title>21&#45;&gt;22</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M870.9906,-575.8314C870.5628,-568.131 870.0541,-558.9743 869.5787,-550.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="873.0724,-550.2037 869.023,-540.4133 866.0831,-550.592 873.0724,-550.2037"/>
</g>
<!-- 29 -->
<g id="node30" class="node">
<title>29</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M721,-468C721,-468 633,-468 633,-468 627,-468 621,-462 621,-456 621,-456 621,-444 621,-444 621,-438 627,-432 633,-432 633,-432 721,-432 721,-432 727,-432 733,-438 733,-444 733,-444 733,-456 733,-456 733,-462 727,-468 721,-468"/>
<text text-anchor="middle" x="677" y="-447.5" font-family="sans" font-size="10.00" fill="#000000">calculate_TIN_scores</text>
</g>
<!-- 21&#45;&gt;29 -->
<g id="edge48" class="edge">
<title>21&#45;&gt;29</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M833.0741,-575.9889C813.9619,-566.4078 791.0168,-553.7712 772,-540 745.4766,-520.7929 718.7038,-494.6827 700.3711,-475.5321"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="702.7101,-472.9114 693.2969,-468.0491 697.6233,-477.7203 702.7101,-472.9114"/>
</g>
<!-- 22&#45;&gt;9 -->
<g id="edge24" class="edge">
<title>22&#45;&gt;9</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M868,-503.8314C868,-496.131 868,-486.9743 868,-478.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="871.5001,-478.4132 868,-468.4133 864.5001,-478.4133 871.5001,-478.4132"/>
</g>
<!-- 22&#45;&gt;29 -->
<g id="edge47" class="edge">
<title>22&#45;&gt;29</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M819.8026,-503.8314C793.8034,-494.0306 761.5464,-481.8709 734.2719,-471.5894"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="735.4426,-468.2904 724.8508,-468.038 732.9734,-474.8404 735.4426,-468.2904"/>
</g>
<!-- 23&#45;&gt;9 -->
<g id="edge26" class="edge">
<title>23&#45;&gt;9</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M749.5135,-575.9721C750.9318,-556.3987 755.8051,-525.1141 772,-504 786.8694,-484.614 810.8089,-471.1278 831.0611,-462.4813"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="832.39,-465.7194 840.3551,-458.7332 829.7718,-459.2274 832.39,-465.7194"/>
</g>
<!-- 23&#45;&gt;22 -->
<g id="edge40" class="edge">
<title>23&#45;&gt;22</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M779.0287,-575.8314C794.2496,-566.6221 812.9128,-555.3301 829.2083,-545.4706"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="831.2369,-548.3341 837.9809,-540.1628 827.6132,-542.345 831.2369,-548.3341"/>
</g>
<!-- 23&#45;&gt;29 -->
<g id="edge49" class="edge">
<title>23&#45;&gt;29</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M728.7914,-575.6949C719.1245,-565.9488 708.1319,-553.2551 701,-540 690.6238,-520.7152 684.5095,-496.6485 681.0516,-478.2556"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="684.4593,-477.4204 679.3105,-468.1608 677.5612,-478.6102 684.4593,-477.4204"/>
</g>
<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
<path fill="none" stroke="#ced856" stroke-width="2" d="M695.5,-252C695.5,-252 614.5,-252 614.5,-252 608.5,-252 602.5,-246 602.5,-240 602.5,-240 602.5,-228 602.5,-228 602.5,-222 608.5,-216 614.5,-216 614.5,-216 695.5,-216 695.5,-216 701.5,-216 707.5,-222 707.5,-228 707.5,-228 707.5,-240 707.5,-240 707.5,-246 701.5,-252 695.5,-252"/>
<text text-anchor="middle" x="655" y="-231.5" font-family="sans" font-size="10.00" fill="#000000">alfa_qc_all_samples</text>
</g>
<!-- 24&#45;&gt;10 -->
<g id="edge27" class="edge">
<title>24&#45;&gt;10</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M625.2236,-215.8314C610.1307,-206.6221 591.6243,-195.3301 575.4657,-185.4706"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="577.1263,-182.3838 566.7669,-180.1628 573.4802,-188.3593 577.1263,-182.3838"/>
</g>
<!-- 25&#45;&gt;12 -->
<g id="edge28" class="edge">
<title>25&#45;&gt;12</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M969.0281,-359.8314C970.3115,-352.131 971.8376,-342.9743 973.2639,-334.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="976.7394,-334.8526 974.9311,-324.4133 969.8347,-333.7018 976.7394,-334.8526"/>
</g>
<!-- 31 -->
<g id="node32" class="node">
<title>31</title>
<path fill="none" stroke="#56d8b1" stroke-width="2" d="M846,-324C846,-324 816,-324 816,-324 810,-324 804,-318 804,-312 804,-312 804,-300 804,-300 804,-294 810,-288 816,-288 816,-288 846,-288 846,-288 852,-288 858,-294 858,-300 858,-300 858,-312 858,-312 858,-318 852,-324 846,-324"/>
<text text-anchor="middle" x="831" y="-303.5" font-family="sans" font-size="10.00" fill="#000000">alfa_qc</text>
</g>
<!-- 25&#45;&gt;31 -->
<g id="edge52" class="edge">
<title>25&#45;&gt;31</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M931.9338,-359.8314C912.1547,-349.2825 887.2517,-336.0009 867.1309,-325.2698"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="868.7289,-322.1555 858.2583,-320.5378 865.4348,-328.3319 868.7289,-322.1555"/>
</g>
<!-- 26&#45;&gt;15 -->
<g id="edge29" class="edge">
<title>26&#45;&gt;15</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M670,-719.8314C670,-712.131 670,-702.9743 670,-694.4166"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="673.5001,-694.4132 670,-684.4133 666.5001,-694.4133 673.5001,-694.4132"/>
</g>
<!-- 27 -->
<g id="node28" class="node">
<title>27</title>
<path fill="none" stroke="#56d873" stroke-width="2" d="M324.5,-756C324.5,-756 237.5,-756 237.5,-756 231.5,-756 225.5,-750 225.5,-744 225.5,-744 225.5,-732 225.5,-732 225.5,-726 231.5,-720 237.5,-720 237.5,-720 324.5,-720 324.5,-720 330.5,-720 336.5,-726 336.5,-732 336.5,-732 336.5,-744 336.5,-744 336.5,-750 330.5,-756 324.5,-756"/>
<text text-anchor="middle" x="281" y="-735.5" font-family="sans" font-size="10.00" fill="#000000">extract_transcriptome</text>
</g>
<!-- 27&#45;&gt;16 -->
<g id="edge30" class="edge">
<title>27&#45;&gt;16</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M273.4297,-719.8314C270.1507,-711.9617 266.238,-702.5712 262.6055,-693.8533"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="265.7492,-692.2979 258.6722,-684.4133 259.2876,-694.9902 265.7492,-692.2979"/>
</g>
<!-- 30 -->
<g id="node31" class="node">
<title>30</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M571.5,-684C571.5,-684 486.5,-684 486.5,-684 480.5,-684 474.5,-678 474.5,-672 474.5,-672 474.5,-660 474.5,-660 474.5,-654 480.5,-648 486.5,-648 486.5,-648 571.5,-648 571.5,-648 577.5,-648 583.5,-654 583.5,-660 583.5,-660 583.5,-672 583.5,-672 583.5,-678 577.5,-684 571.5,-684"/>
<text text-anchor="middle" x="529" y="-663.5" font-family="sans" font-size="10.00" fill="#000000">create_index_salmon</text>
</g>
<!-- 27&#45;&gt;30 -->
<g id="edge51" class="edge">
<title>27&#45;&gt;30</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M336.656,-721.8418C374.5721,-710.8339 424.8861,-696.2266 464.5445,-684.7129"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="465.7559,-688.0058 474.3835,-681.8564 463.8042,-681.2834 465.7559,-688.0058"/>
</g>
<!-- 28&#45;&gt;17 -->
<g id="edge31" class="edge">
<title>28&#45;&gt;17</title>
<path fill="none" stroke="#c0c0c0" stroke-width="2" d="M459.5509,-719.8314C449.1822,-711.0485 436.5771,-700.3712 425.3354,-690.8489"/>
<polygon fill="#c0c0c0" stroke="#c0c0c0" stroke-width="2" points="427.3349,-687.9556 417.4422,-684.1628 422.8105,-693.297 427.3349,-687.9556"/>
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